PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100250060031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 273aa MW: 30777.9 Da PI: 5.8351 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.5 | 1e-12 | 74 | 117 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er RR+++++ f++L llP+ + +K +K++i+ +Av+YIk+L+ Ote100250060031|100250060031 74 TERERRKKMRNMFSNLHALLPHiP-----PKADKSTIVDEAVNYIKKLE 117 7*********************88.....8****************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.15E-15 | 64 | 129 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.98 | 66 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.1E-14 | 71 | 129 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.56E-12 | 71 | 120 | No hit | No description |
SMART | SM00353 | 2.6E-8 | 74 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.3E-10 | 74 | 117 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 9.60E-5 | 186 | 252 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence Send to blast |
MATAEELDHE ELLWEDQSWA FPNLGNTEKD KSTDHISYSE AAKDEAVPPP SAKVKKRRGA 60 ASGEPEDHEL HIWTERERRK KMRNMFSNLH ALLPHIPPKA DKSTIVDEAV NYIKKLEQNV 120 DELEKQKMER YYNGDNKLLT VQPREAFVAE QGSWSNLGVA LASPNPVLMG PAYQPIFKTW 180 TSPNVILNIC GRDGHINVCS MKKPGLLAAV CFVMDKHNLE VVSAQASSDL SRCMYMIHAR 240 QANGGSDDQF QQVFPIEETF KQAAAEIMLW VTS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011088239.1 | 1e-109 | transcription factor bHLH95-like isoform X1 | ||||
TrEMBL | A0A2G9GTZ4 | 1e-114 | A0A2G9GTZ4_9LAMI; Uncharacterized protein | ||||
STRING | VIT_03s0063g00170.t01 | 1e-85 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1324 | 23 | 69 |