PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100250060031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 273aa    MW: 30777.9 Da    PI: 5.8351
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100250060031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.51e-1274117855
                                   HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                    Er RR+++++ f++L  llP+ +     +K +K++i+ +Av+YIk+L+
  Ote100250060031|100250060031  74 TERERRKKMRNMFSNLHALLPHiP-----PKADKSTIVDEAVNYIKKLE 117
                                   7*********************88.....8****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.15E-1564129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.9866116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-1471129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.56E-1271120No hitNo description
SMARTSM003532.6E-874122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.3E-1074117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048739.60E-5186252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MATAEELDHE ELLWEDQSWA FPNLGNTEKD KSTDHISYSE AAKDEAVPPP SAKVKKRRGA  60
ASGEPEDHEL HIWTERERRK KMRNMFSNLH ALLPHIPPKA DKSTIVDEAV NYIKKLEQNV  120
DELEKQKMER YYNGDNKLLT VQPREAFVAE QGSWSNLGVA LASPNPVLMG PAYQPIFKTW  180
TSPNVILNIC GRDGHINVCS MKKPGLLAAV CFVMDKHNLE VVSAQASSDL SRCMYMIHAR  240
QANGGSDDQF QQVFPIEETF KQAAAEIMLW VTS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088239.11e-109transcription factor bHLH95-like isoform X1
TrEMBLA0A2G9GTZ41e-114A0A2G9GTZ4_9LAMI; Uncharacterized protein
STRINGVIT_03s0063g00170.t011e-85(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369