PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100249220142

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

G2-like

Protein Properties

Length: 262aa MW: 29646.7 Da PI: 8.784

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100249220142	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.6	1.4e-28	11	65	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+q+GG+++AtPk il++m ++gLt+ hvkSHLQkYR+ Ote100249220142\|100249220142 11 KERLKWTKELHDLFEKAVNQIGGPDRATPKGILKAMAIPGLTIFHVKSHLQKYRM 65 68****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.05E-17	8	65	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.9E-27	9	66	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.4E-22	11	65	IPR006447	Myb domain, plants
Pfam	PF00249	7.7E-8	13	64	IPR001005	SANT/Myb domain
Pfam	PF14379	4.5E-18	98	142	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MGSNRANCSS KERLKWTKEL HDLFEKAVNQ IGGPDRATPK GILKAMAIPG LTIFHVKSHL 60 QKYRMSVFTR EEDHTKGKLE RRSVSEMLPN FSALSGAQLN EALLIQMEAQ RRLSDQLEVQ 120 KSLKMKIEAQ GRFLDKIMEE YKNRSPGTKQ IKPYSPVLSL PSLSEESDQS NGKEFESDSS 180 EVGEISSKEE FRAQKRIKIQ EQNVMPQINR APSFNLDSQS LNLFCLDGIS KNLYSDQEMG 240 CPWGGNAFSS PLLLGMYNQL NQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	4e-20	11	68	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	4e-20	11	68	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	4e-20	11	68	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	4e-20	11	68	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	5e-20	11	68	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011077547.1	1e-148	myb family transcription factor PHL7
Refseq	XP_011077550.1	1e-148	myb family transcription factor PHL7
Refseq	XP_020549678.1	1e-148	myb family transcription factor PHL7
Swissprot	Q9SJW0	2e-45	PHL7_ARATH; Myb family transcription factor PHL7
TrEMBL	A0A022QJI3	1e-136	A0A022QJI3_ERYGU; Uncharacterized protein
STRING	Migut.L02017.1.p	1e-137	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10101	20	26