PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100247590262 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 234aa MW: 26660.5 Da PI: 7.3828 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.5 | 6.3e-10 | 83 | 130 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rEr RR ++N++f eL +l + + K +K++iL A++ +++L Ote100247590262|100247590262 83 TKACRERERRGKLNDRFLELSAILEPG---RPVKTEKVAILSDAIRLLNKL 130 5678**********************8...89**************99887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.509 | 79 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.1E-7 | 83 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.22E-7 | 83 | 135 | No hit | No description |
SuperFamily | SSF47459 | 2.88E-11 | 85 | 153 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.1E-8 | 85 | 136 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.2E-10 | 86 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence Send to blast |
MHNYHVDSFT ENCWCDLIDY SSLLDDGAPP PDFYESPPEP PSENVCMSID ILLSEITTQA 60 ITSEKRGSPR KRGRSDLHGG IGTKACRERE RRGKLNDRFL ELSAILEPGR PVKTEKVAIL 120 SDAIRLLNKL KAESQEYTEM NKRLMEEIKT LKAEKNEIRE EKLKLKADKY RMEQQLKTMN 180 IPATGFTAAP PAVYQAEVNK VRMLPSYGFV PMWQYLSPSV RDTSQDDKLR PPAA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011091209.1 | 1e-112 | transcription factor bHLH104 | ||||
Refseq | XP_011091210.1 | 1e-112 | transcription factor bHLH104 | ||||
Swissprot | Q8L467 | 2e-60 | BH104_ARATH; Transcription factor bHLH104 | ||||
TrEMBL | A0A0H3YB45 | 1e-116 | A0A0H3YB45_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.G00474.1.p | 1e-107 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4762 | 21 | 32 |