PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Ote100247590261 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 266aa MW: 29839.1 Da PI: 7.3386 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.3 | 7.8e-10 | 83 | 130 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rEr RR ++N++f eL +l + + K +K++iL A++ +++L Ote100247590261|100247590261 83 TKACRERERRGKLNDRFLELSAILEPG---RPVKTEKVAILSDAIRLLNKL 130 5678**********************8...89**************99887 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.509 | 79 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.6E-7 | 83 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.49E-7 | 83 | 135 | No hit | No description |
SMART | SM00353 | 1.1E-8 | 85 | 136 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.66E-11 | 85 | 153 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.9E-10 | 86 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 266 aa Download sequence Send to blast |
MHNYHVDSFT ENCWCDLIDY SSLLDDGAPP PDFYESPPEP PSENVCMSID ILLSEITTQA 60 ITSEKRGSPR KRGRSDLHGG IGTKACRERE RRGKLNDRFL ELSAILEPGR PVKTEKVAIL 120 SDAIRLLNKL KAESQEYTEM NKRLMEEIKT LKAEKNEIRE EKLKLKADKY RMEQQLKTMN 180 IPATGFTAAP PAVYQAEVNK VRMLPSYGVS LALCQEFSLS DACDRNTGKG AHGFPFRIGC 240 CTNINSDSGK HKFECGIFSP FTALIA |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011091209.1 | 3e-93 | transcription factor bHLH104 | ||||
Refseq | XP_011091210.1 | 3e-93 | transcription factor bHLH104 | ||||
Swissprot | Q8L467 | 1e-44 | BH104_ARATH; Transcription factor bHLH104 | ||||
TrEMBL | A0A0H3YB45 | 2e-97 | A0A0H3YB45_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.G00474.1.p | 8e-90 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4762 | 21 | 32 |