PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100245170011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bZIP | ||||||||
Protein Properties | Length: 395aa MW: 42235.8 Da PI: 6.5897 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 75.2 | 8.7e-24 | 284 | 346 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e+k+++rkq+NRe+ArrsR+RK+ae+eeL+ kv++L +eN++L++e+++l +e++k +se+ Ote100245170011|100245170011 284 EREIKKQKRKQSNRESARRSRLRKQAECEELQHKVETLNSENHSLRDEIQRLAEECEKITSEN 346 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.5E-31 | 25 | 120 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 6.3E-9 | 137 | 255 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-19 | 279 | 343 | No hit | No description |
SMART | SM00338 | 3.7E-23 | 284 | 348 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.0E-21 | 284 | 346 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.288 | 286 | 349 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.06E-12 | 287 | 343 | No hit | No description |
CDD | cd14702 | 1.06E-25 | 289 | 339 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 291 | 306 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence Send to blast |
MTVGVNFPFR ILPYVKLGSA TASLMGTGEE STQSKSSKPP SSSQEAPVTP TTPMYPDWSS 60 SMQAFYGPGA APPFFASTVA SPPPHPYLWG GQHPMMAPYG TPVPYPAIYP PGGIYAHPNM 120 ATTPGAIHGT AESEGKERSS SKKTKGPSAN HNMIGGKTLE GGKAASGSGN DYGTHSAESG 180 SEGSSDASDE NNNQDFSAAK KGSFDQMLVD GANAQNNGIP TNFPNSIPGN PVGTVPATNL 240 NIGMDLWNNT HAGSGPMKLR PNSVGVTQGI PPSGMMNDQW TPDEREIKKQ KRKQSNRESA 300 RRSRLRKQAE CEELQHKVET LNSENHSLRD EIQRLAEECE KITSENNSMK EELSRLGVDS 360 DTHTGGDEVN GVVYTCLHST PIKPVLLELT IRRIS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter (PubMed:1373374). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional activator in light-regulated expression of LHCB2.4. Probably binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:1373374, ECO:0000269|PubMed:22718771}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097214.1 | 0.0 | G-box-binding factor 1-like isoform X1 | ||||
Swissprot | P42774 | 3e-97 | GBF1_ARATH; G-box-binding factor 1 | ||||
TrEMBL | A0A4D9BV77 | 0.0 | A0A4D9BV77_SALSN; Plant G-box-binding factor | ||||
STRING | Migut.L00297.1.p | 1e-154 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3780 | 24 | 46 |