PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100244760081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | FAR1 | ||||||||
Protein Properties | Length: 225aa MW: 25651.8 Da PI: 5.3329 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 86.3 | 4.7e-27 | 56 | 145 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 +fYn+YA++vGF vr+ + ++s+ +g++ r++ C+k+g++ + k +e+++r++ r gCka++ k+ek+gkw+vt++ Ote100244760081|100244760081 56 RFYNDYARRVGFVVRVMQRRRSEIDGRTLARRLGCNKQGFSPNAKGLIGSEKKPRPSAREGCKATILFKLEKSGKWVVTRF 136 5*******************************************9999********************************* PP FAR1 82 eleHnHela 90 ++eHnH+l+ Ote100244760081|100244760081 137 VKEHNHALV 145 *******96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 2.9E-25 | 56 | 145 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MVEVTAGDSD KEDLNSRDSE EDDLIEAEEK TWSTEGGEAI EPRVGMEFDS EDDARRFYND 60 YARRVGFVVR VMQRRRSEID GRTLARRLGC NKQGFSPNAK GLIGSEKKPR PSAREGCKAT 120 ILFKLEKSGK WVVTRFVKEH NHALVVTAHE YTNVLDKDKR IQELARELQK QEEMCAAYRE 180 RLVNLLSTVE GQSERMSSKI LAVVENVKRA EEEALEEALT LGTNR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011089611.1 | 1e-117 | protein FAR1-RELATED SEQUENCE 2 | ||||
TrEMBL | A0A4D8ZVZ8 | 1e-138 | A0A4D8ZVZ8_SALSN; Uncharacterized protein | ||||
STRING | Migut.N00673.1.p | 1e-112 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11602 | 20 | 25 |