PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100243400021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 176aa    MW: 19942.3 Da    PI: 9.0004
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100243400021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.7e-1267112550
                                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                                   kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Ote100243400021|100243400021  67 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 112
                                   99***********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-1463127IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.6865117IPR004827Basic-leucine zipper domain
PfamPF001701.2E-1067112IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-1467118No hitNo description
SuperFamilySSF579593.86E-1267121No hitNo description
CDDcd147035.36E-2168118No hitNo description
PROSITE patternPS0003607085IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MGFDRLDDEQ LQNMFSDDVV ALRSSSNPST ATPSDHNSDN DDKRIAPELH PPRSPENSPG  60
DAVADPKRIK RILANRQSAQ RSRVRKLQYI SELERSVTTL QTEVSALSPR VAFLDHQRLI  120
LNVDNSALKQ RIAALAQDKI FKDALKKEIE RLRKIFHEQK MKKSKGGDEA AEENNE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082729.12e-78basic leucine zipper 61
SwissprotQ9M2K42e-62BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A4D8Z5786e-75A0A4D8Z578_SALSN; Uncharacterized protein
STRINGXP_010279202.11e-74(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]