PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100243370211
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 194aa    MW: 21396.2 Da    PI: 9.6083
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100243370211genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.32.8e-08166192430
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                                   +h+ +Er RR++iNs++  L+el+P +
  Ote100243370211|100243370211 166 SHSLAERARRENINSRMKLLQELVPGC 192
                                   8************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-8160193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.67E-5160194No hitNo description
PROSITE profilePS5088811.757162194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-8165192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-6166192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MGSRFDEFHG LISGPPVTTG SSFTALLELP PPQAVELLVK EDFPAKHAPP PIFPTDIGLI  60
HRASKFSIFA SADNSLEKMK LDAVXXXXXX XXXRLPPEFF FSGGVRPVPE VQQAKGEGEK  120
GELNAIAVKK SNKKRKNMVA NEPSDDDGEK LSYVHVRARR GQATDSHSLA ERARRENINS  180
RMKLLQELVP GCNK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078863.17e-70transcription factor bHLH48
TrEMBLA0A0H3YC281e-73A0A0H3YC28_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.K00063.1.p5e-60(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40292342