PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100243370041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 311aa MW: 34371.7 Da PI: 6.5133 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.3 | 7.8e-10 | 166 | 213 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iNs++ L+el+P + +k a++L + +++++ Lq Ote100243370041|100243370041 166 SHSLAERARRENINSRMKLLQELVPGC----NKISGTATVLDEIINHVQALQ 213 8*************************9....899999***********9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.49E-14 | 160 | 221 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.36E-10 | 160 | 217 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.4E-14 | 162 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.653 | 162 | 212 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.1E-7 | 166 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.4E-9 | 168 | 218 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MGSRFDEFHG LISGPPVTTG SSFTALLELP PPQAVELLVK EDFPAKHAPP PIFPTDIGLI 60 HRASKFSIFA SADNSLEKMK LDAVXXXXXX XXXRLPPEFF FSGGVRPVPE VQQAKGEGEK 120 GELNAIAVKK SNKKRKNMVA NEPSDDDGEK LSYVHVRARR GQATDSHSLA ERARRENINS 180 RMKLLQELVP GCNKISGTAT VLDEIINHVQ ALQRQVELLF WHQFLSMRLA AVTPGIDSDI 240 DSLFAANGCS NERGMFTPPI FLDGQNNGPG QLQFQQLWHC NELHQSVWAR EADNSIFITP 300 ANSLMNDHSS G |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011078863.1 | 1e-114 | transcription factor bHLH48 | ||||
TrEMBL | A0A0H3YC28 | 1e-135 | A0A0H3YC28_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.K00063.1.p | 1e-101 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4029 | 23 | 42 |