PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100240880051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | LBD | ||||||||
Protein Properties | Length: 118aa MW: 13859.7 Da PI: 4.3715 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 55.1 | 2.2e-17 | 1 | 83 | 18 | 100 |
DUF260 18 lapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +apyfpa+ p++f+ + F ++ v++ +++lp++ r++a+ ++yeA rardP G++ v++kl+ +l++ ael + Ote100240880051|100240880051 1 MAPYFPAQYPERFETLSTHFDVDYVVECVETLPPDCRREAVVNMFYEAYQRARDPAGGCYDVFRKLRADLQSRIAELLIVT 81 59*********************************************************************9999998776 PP DUF260 99 ee 100 ee Ote100240880051|100240880051 82 EE 83 65 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03195 | 4.6E-15 | 1 | 77 | IPR004883 | Lateral organ boundaries, LOB |
PROSITE profile | PS50891 | 13.234 | 1 | 84 | IPR004883 | Lateral organ boundaries, LOB |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence Send to blast |
MAPYFPAQYP ERFETLSTHF DVDYVVECVE TLPPDCRREA VVNMFYEAYQ RARDPAGGCY 60 DVFRKLRADL QSRIAELLIV TEEIAFQRSR FIDLKKKIDD RIDDEEPDSS IPSLQQFL |