PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100239950061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 341aa    MW: 38932.3 Da    PI: 6.417
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100239950061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM122.92.7e-38391632128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   ppG+rF P+deel+  yL+kk++g+ l++  +i+++ +++++P++L  k+ + ++ +wyfF+ r++ky++gkr+ r ++ g
  Ote100239950061|100239950061  39 PPGYRFVPSDEELILGYLHKKIHGHILPI--HIHQICLTRTNPNSLTeKHPRIGDGDWYFFTWRNRKYPNGKRPDRGAEGG 117
                                   9*************************999..7**************8556666899********************99*** PP

                           NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +Wk t  +k+v++ ++e +g ++tLvfy+g+ ++++kt+W+mheyr+
  Ote100239950061|100239950061 118 FWKPTDGEKSVKV-GDEIIGYRNTLVFYEGKPKNAKKTRWTMHEYRI 163
                                   *************.999****************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510056.345114IPR003441NAC domain
SuperFamilySSF1019416.67E-4636179IPR003441NAC domain
PROSITE profilePS5100545.68538180IPR003441NAC domain
PfamPF023652.8E-2239163IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MRLDDCVLCR VYQKASVAST SRKAEAAEED DNNSVNPYPP GYRFVPSDEE LILGYLHKKI  60
HGHILPIHIH QICLTRTNPN SLTEKHPRIG DGDWYFFTWR NRKYPNGKRP DRGAEGGFWK  120
PTDGEKSVKV GDEIIGYRNT LVFYEGKPKN AKKTRWTMHE YRIKESPSLD DCVLCRIYKS  180
AARPTASRRR RSSPNPNDNA VELQHQYCYN NEDQDPNINT SSFGESLAQD LLQDSLFFSM  240
EDLGLADADQ EMETQQMIVN PQPQAFGFNE STASTPTFGF DQSPQSSSTW SRCSRCWCPA  300
KSTSVSCSMC TWCSNNNATN ISFTDLLLNH IDNKEDEERK L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-35261798167NAC domain-containing protein 19
3swm_B2e-35261798167NAC domain-containing protein 19
3swm_C2e-35261798167NAC domain-containing protein 19
3swm_D2e-35261798167NAC domain-containing protein 19
3swp_A2e-35261798167NAC domain-containing protein 19
3swp_B2e-35261798167NAC domain-containing protein 19
3swp_C2e-35261798167NAC domain-containing protein 19
3swp_D2e-35261798167NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103