PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100239950021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

NAC

Protein Properties

Length: 157aa MW: 18013.6 Da PI: 9.1868

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100239950021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.3	1.1e-34	7	157	1	125
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............................kvk 52 lp G+rF P+d++l+ eyL+kk++g +++ i+++ + +++P+++ k Ote100239950021\|100239950021 7 LPLGYRFVPSDQQLILEYLQKKIDGLAIPI--PIPHICLKRTNPNSFTGstisytisinffqtlfkqlkiiyaefaetYPK 85 699**********************999..799999***9984579999**99999999888877664333 PP NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhe 125 ++ +wy F++rd+ky++g+r+ ra++ gyWka+g dk++++ +ge++g kk+Lvfy+g+a++g+kt W+m+e Ote100239950021\|100239950021 86 IGRGDWYLFTSRDRKYRNGTRPDRAAEGGYWKASGADKSIVV-EGEVIGYKKVLVFYEGEAQNGRKTGWIMNE 157 3667**********************************.999***********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.7E-33	4	51	IPR003441	NAC domain
PROSITE profile	PS51005	36.629	7	157	IPR003441	NAC domain
Pfam	PF02365	4.3E-19	8	157	IPR003441	NAC domain
SuperFamily	SSF101941	1.7E-33	85	157	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence Send to blast
MDTELELPLG YRFVPSDQQL ILEYLQKKID GLAIPIPIPH ICLKRTNPNS FTGSTISYTI 60 SINFFQTLFK QLKIIYAEFA ETYPKIGRGD WYLFTSRDRK YRNGTRPDRA AEGGYWKASG 120 ADKSIVVEGE VIGYKKVLVF YEGEAQNGRK TGWIMNE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-31	2	157	10	137	Stress-induced transcription factor NAC1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA746	24	103