PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100238850151 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 355aa MW: 38529.2 Da PI: 5.7548 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.4 | 2e-06 | 211 | 248 | 12 | 54 |
HHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 RR+ri +++ L++l+P+ + K + a++L + v+Y+k L Ote100238850151|100238850151 211 RRERIAERIRALQDLVPSvN------KTDRAAMLDEIVDYVKFL 248 9*****************55......****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 9.6E-12 | 189 | 258 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.322 | 199 | 248 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.5E-5 | 205 | 254 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 7.46E-11 | 210 | 258 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 0.00164 | 222 | 253 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MASNNPGDAP SDDFFEQILG FQGYATGADA NLVGNEAPAA AAMXXXXXXX XXXXXXXXXX 60 XXXXXXLGGP MGAGXXXXXX XXXXXXXFPL GLSLEQGKAG FLDASGSGRR FLRDDIFDLR 120 GASAVKPGSI VHADSGGNDG IKNNAVGVNN VISRVSWSTN VKYSSXXXXX XXXXAVRPRV 180 RARRGQATDP HSIAERVFTI LSNYNSYHSL RRERIAERIR ALQDLVPSVN KTDRAAMLDE 240 IVDYVKFLRL QVKVLSMSRL GGAGAVAPLV TDIPISSVEE DGSDDGRTQP AWEKWSNDGT 300 ERQVAKLMEE NVGAAMQFLQ SKALCLMPIS LASAIYHAQP PDTIQLVKPE SDPPL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831677.1 | 1e-125 | PREDICTED: transcription factor UNE12 | ||||
Swissprot | O22768 | 4e-94 | UNE12_ARATH; Transcription factor UNE12 | ||||
TrEMBL | A0A022S2E7 | 1e-124 | A0A022S2E7_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D00370.1.p | 1e-125 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5799 | 24 | 34 |
Publications ? help Back to Top | |||
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