PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100238850151
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 355aa    MW: 38529.2 Da    PI: 5.7548
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100238850151genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.42e-062112481254
                                   HHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                           HLH  12 RRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                   RR+ri +++  L++l+P+ +      K + a++L + v+Y+k L
  Ote100238850151|100238850151 211 RRERIAERIRALQDLVPSvN------KTDRAAMLDEIVDYVKFL 248
                                   9*****************55......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.109.6E-12189258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.322199248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-5205254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.46E-11210258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00164222253No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MASNNPGDAP SDDFFEQILG FQGYATGADA NLVGNEAPAA AAMXXXXXXX XXXXXXXXXX  60
XXXXXXLGGP MGAGXXXXXX XXXXXXXFPL GLSLEQGKAG FLDASGSGRR FLRDDIFDLR  120
GASAVKPGSI VHADSGGNDG IKNNAVGVNN VISRVSWSTN VKYSSXXXXX XXXXAVRPRV  180
RARRGQATDP HSIAERVFTI LSNYNSYHSL RRERIAERIR ALQDLVPSVN KTDRAAMLDE  240
IVDYVKFLRL QVKVLSMSRL GGAGAVAPLV TDIPISSVEE DGSDDGRTQP AWEKWSNDGT  300
ERQVAKLMEE NVGAAMQFLQ SKALCLMPIS LASAIYHAQP PDTIQLVKPE SDPPL
Functional Description ? help Back to Top
Source Description
UniProtRequired for ovule fertilization. {ECO:0000269|PubMed:15634699}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831677.11e-125PREDICTED: transcription factor UNE12
SwissprotO227684e-94UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A022S2E71e-124A0A022S2E7_ERYGU; Uncharacterized protein
STRINGMigut.D00370.1.p1e-125(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57992434
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]