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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Ote100238230051 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
|
| Family |
GRAS |
| Protein Properties |
Length: 284aa MW: 31733.1 Da PI: 5.0309 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ote100238230051 | genome | OteDB | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 247.2 | 6.4e-76 | 1 | 284 | 104 | 374 |
GRAS 104 eavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..............skeeleetgerLakfA 169
ea+e+++++Hi+Df+i qG+QW+a+lqaLa+Rp+g+p ++Ri g+ +p+ g L++fA
Ote100238230051|100238230051 1 EATENASKIHIVDFGIVQGIQWAAFLQALATRPAGKPeKIRISGIPAPAIGdspassplxxxxxxXXXXXXXXXXXLQEFA 81
7999*****************************76666*********99889999999*9999887888889999****** PP
GRAS 170 eelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhns 250
+ l+++fef + v + + +l+ +++rv+p+Ea+aVn++lql++llde+ + + + Lkl ksl+P v+++ e e++ n+
Ote100238230051|100238230051 82 KLLDLDFEFVP-VLTPVLELTASSFRVDPDEAVAVNFMLQLYNLLDETNEGVE---SALKLAKSLNPCVFTLGEYEVSSNR 158
***********.7999*****************************88887777...9************************ PP
GRAS 251 esFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplse 331
+ Fl+rf +al+yy+a+f+sle++l+r+s eri +E+ llgr+i +v e ++ rer+e +e+Wr +e aGF+p+ +s+
Ote100238230051|100238230051 159 AGFLTRFKNALKYYTAVFESLESNLARDSPERIQLEKLLLGRRIAGAVGPEDRK-RERMEDKERWRILMEGAGFQPLLFSH 238
****************************************************98.9************************* PP
GRAS 332 kaakqaklllrkvk.sdgyrveee..sgslvlgWkdrpLvsvSaWr 374
+a++qak ll +++ s y++ ++ g l l W+d pL++vS+Wr
Ote100238230051|100238230051 239 YAMSQAKILLWNYSsSASYKLLDSspPGFLSLAWNDVPLLTVSSWR 284
**************9899**98662245566**************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 284 aa
Download sequence Send
to blast |
EATENASKIH IVDFGIVQGI QWAAFLQALA TRPAGKPEKI RISGIPAPAI GDSPASSPLX 60
XXXXXXXXXX XXXXXXLQEF AKLLDLDFEF VPVLTPVLEL TASSFRVDPD EAVAVNFMLQ 120
LYNLLDETNE GVESALKLAK SLNPCVFTLG EYEVSSNRAG FLTRFKNALK YYTAVFESLE 180
SNLARDSPER IQLEKLLLGR RIAGAVGPED RKRERMEDKE RWRILMEGAG FQPLLFSHYA 240
MSQAKILLWN YSSSASYKLL DSSPPGFLSL AWNDVPLLTV SSWR
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
