PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100236530051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 521aa MW: 59220.4 Da PI: 6.5723 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 183.3 | 5.8e-57 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk 79 lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk Ote100236530051|100236530051 6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATK 85 79****************************.99***************6434555777*********************** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 sgyWkatgkd++v s ++++vg+kktLv+y+grap+g +tdWvmheyrl Ote100236530051|100236530051 86 SGYWKATGKDRKVNS-QTRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 ***************.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.03E-64 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 62.105 | 6 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 521 aa Download sequence Send to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKSGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDDRECDT PSSGLQDAYA LCRVFKKSLN IPKIGENYVT SGVCDRSSSI 180 DVHCEAKYED VDCWDYPTMP LTSSSTGNMA SSSSADPTWA QYLSEEAFAF TNNPYANCSY 240 PPSKVDIALE CARLQHRFSL PPLEVQDYSM DPRMPYANML NGNTNQPADI VQEILSVAQA 300 SQNLQNQQPL SGNYAPADDF SFFLDGGHGS DMNYSRYLEN IGEDLNHRSX XXXXXXXXXX 360 XXXXXXGMSN KQLETAFPED FKTVPIENIS NIQREYHDFQ VALSSDNFLQ LEDGDMDDFS 420 STPSFEVYEK VEINHGLLVS TRQKPNTFYH KMVPSKILKV HINPMIVHQI SSPKSAFHTT 480 PKTGYSSFKG RLRGEVKNIK SYLTFALALC AIWVQIVTPF A |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 6e-56 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-56 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-56 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-56 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_B | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_C | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_D | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_A | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_B | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_C | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_D | 7e-56 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
4dul_A | 6e-56 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 6e-56 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00212 | DAP | Transfer from AT1G65910 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011096933.1 | 0.0 | NAC domain-containing protein 45 | ||||
TrEMBL | A0A2G9GMX5 | 0.0 | A0A2G9GMX5_9LAMI; Uncharacterized protein | ||||
STRING | Migut.K00745.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1495 | 23 | 48 |