PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100236530051
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family NAC
Protein Properties Length: 521aa    MW: 59220.4 Da    PI: 6.5723
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100236530051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM183.35.8e-5761331128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratk 79 
                                   lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk
  Ote100236530051|100236530051   6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATK 85 
                                   79****************************.99***************6434555777*********************** PP

                           NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   sgyWkatgkd++v s ++++vg+kktLv+y+grap+g +tdWvmheyrl
  Ote100236530051|100236530051  86 SGYWKATGKDRKVNS-QTRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133
                                   ***************.9999***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.03E-644157IPR003441NAC domain
PROSITE profilePS5100562.1056157IPR003441NAC domain
PfamPF023651.4E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKSGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDDRECDT PSSGLQDAYA LCRVFKKSLN IPKIGENYVT SGVCDRSSSI  180
DVHCEAKYED VDCWDYPTMP LTSSSTGNMA SSSSADPTWA QYLSEEAFAF TNNPYANCSY  240
PPSKVDIALE CARLQHRFSL PPLEVQDYSM DPRMPYANML NGNTNQPADI VQEILSVAQA  300
SQNLQNQQPL SGNYAPADDF SFFLDGGHGS DMNYSRYLEN IGEDLNHRSX XXXXXXXXXX  360
XXXXXXGMSN KQLETAFPED FKTVPIENIS NIQREYHDFQ VALSSDNFLQ LEDGDMDDFS  420
STPSFEVYEK VEINHGLLVS TRQKPNTFYH KMVPSKILKV HINPMIVHQI SSPKSAFHTT  480
PKTGYSSFKG RLRGEVKNIK SYLTFALALC AIWVQIVTPF A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-56115712165NO APICAL MERISTEM PROTEIN
1ut4_B6e-56115712165NO APICAL MERISTEM PROTEIN
1ut7_A6e-56115712165NO APICAL MERISTEM PROTEIN
1ut7_B6e-56115712165NO APICAL MERISTEM PROTEIN
3swm_A7e-56115715168NAC domain-containing protein 19
3swm_B7e-56115715168NAC domain-containing protein 19
3swm_C7e-56115715168NAC domain-containing protein 19
3swm_D7e-56115715168NAC domain-containing protein 19
3swp_A7e-56115715168NAC domain-containing protein 19
3swp_B7e-56115715168NAC domain-containing protein 19
3swp_C7e-56115715168NAC domain-containing protein 19
3swp_D7e-56115715168NAC domain-containing protein 19
4dul_A6e-56115712165NAC domain-containing protein 19
4dul_B6e-56115712165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096933.10.0NAC domain-containing protein 45
TrEMBLA0A2G9GMX50.0A0A2G9GMX5_9LAMI; Uncharacterized protein
STRINGMigut.K00745.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348