PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100235580021
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ERF
Protein Properties Length: 385aa    MW: 42407.5 Da    PI: 5.5646
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100235580021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18129179155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                   + y+GVr++  +g+WvAeIr+p     +   r +lg+fgta eAa a+++a+++++g
  Ote100235580021|100235580021 129 CNYRGVRQRT-WGKWVAEIREP-----HrgSRLWLGTFGTAPEAALAYDEAARAMYG 179
                                   56*****999.**********6.....337************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.04E-32129188No hitNo description
PfamPF008471.8E-13129179IPR001471AP2/ERF domain
SMARTSM003804.7E-36130193IPR001471AP2/ERF domain
PROSITE profilePS5103221.628130187IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-31130188IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-21130188IPR016177DNA-binding domain
PRINTSPR003671.2E-9131142IPR001471AP2/ERF domain
PRINTSPR003671.2E-9153169IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
QYQKLLALTN SNTKTNCLYL LRAHIGENPL KTTDLSKKYC TIILFLGEIA PVENCSEMTS  60
QPMDYSRKRK SRSRKSGTKS VSEVLEKWKE FNTKLDTLQV DDKPTRKAPA KGSKKGCMKG  120
KGGPDNSRCN YRGVRQRTWG KWVAEIREPH RGSRLWLGTF GTAPEAALAY DEAARAMYGP  180
CARLNFPNYT SSASATVSSS DSMNSSISEV CCDGDRQRLD VPSMKTEGAL ATNCGLHDAG  240
TPMSAPIKEE VMEEAPREKV KEEAREEVRK EPTGCLDSVG GRLSTLDKSS DYPIENFPLD  300
EMFDVDELLA ALDGGPYNSS RAHAGAGSYG GQAGNDNQLG YPNMQHEQAL PGNDNDLDFL  360
KPGRQEDYNF LLSDLMLDLD SDLAV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-18130187260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858842.11e-105PREDICTED: dehydration-responsive element-binding protein 2A-like
TrEMBLA0A4D8ZYT91e-105A0A4D8ZYT9_SALSN; EREBP-like factor
STRINGMigut.F00629.1.p1e-105(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37012445