PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100235060051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family WOX
Protein Properties Length: 267aa    MW: 30355.3 Da    PI: 9.4868
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100235060051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox71.97.4e-2370129357
                                   --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                      Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                   +R+++t+eql++Lee++++  r+psae+++++A+kl    +++ ++V++WFqN++a+e++
  Ote100235060051|100235060051  70 TRWNPTPEQLQALEEMYRRgIRTPSAEQIQQIAAKLgsfgKIEGKNVFYWFQNHKARERQ 129
                                   8*****************99**************************************97 PP
2Wus_type_Homeobox114.74.7e-3769131365
             Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                                   +tRW+PtpeQ++ Lee+y++G+rtP++e+iq+i+a+L ++Gkie+kNVfyWFQN+kaRerqk+
  Ote100235060051|100235060051  69 STRWNPTPEQLQALEEMYRRGIRTPSAEQIQQIAAKLGSFGKIEGKNVFYWFQNHKARERQKK 131
                                   79***********************************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003893.1E-767134IPR001356Homeobox domain
SuperFamilySSF466898.13E-1570135IPR009057Homeodomain-like
CDDcd000866.19E-970131No hitNo description
PfamPF000461.9E-2070129IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.4E-1070129IPR009057Homeodomain-like
PROSITE profilePS5007111.61275130IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048513Biological Processanimal organ development
GO:0099402Biological Processplant organ development
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MWMMMHSNND ELKPTSGDLV IGRKLRPLMP RPMSSCTANH PYSTPSCCCT RNPKTLSWNH  60
PLAAAPLVST RWNPTPEQLQ ALEEMYRRGI RTPSAEQIQQ IAAKLGSFGK IEGKNVFYWF  120
QNHKARERQK KRRQLELLAG KNMHHAHTSH TKQTGLGRRY FENENHKKVP MPSNCSTPSE  180
DSASMHGAVI AAEPELNHKL ATAENETCWQ LDLSPPQQNT YPXXXXXXXX XNQTLQLFPT  240
GPVAPHHTVN LPPNVNIEFI EFLPIKN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070619.13e-73WUSCHEL-related homeobox 1-like
TrEMBLA0A2G9I8901e-77A0A2G9I890_9LAMI; Uncharacterized protein
STRINGMigut.L00355.1.p1e-72(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46812342