PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100233250161
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family ARR-B
Protein Properties Length: 360aa    MW: 41107 Da    PI: 7.7161
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100233250161genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like673.3e-21161209554
                       G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                                   +Wt+eLH++F++a+eqL G+ +  Pk+ile+m+ +gLt+ +v+SHLQk R
  Ote100233250161|100233250161 161 EWTQELHAKFMNAIEQL-GEGRCFPKEILEMMNEPGLTRMQVASHLQKCR 209
                                   7****************.9*****************************98 PP
2Response_reg24.91e-0966841105
                                   HHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HH CS
                  Response_reg  41 ekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpe 105
                                   + ++D+++  i+ p++++l+ll++  +    +p+++++  ++   a +al+ Ga  ++ Kp ++e
  Ote100233250161|100233250161   6 KAKFDVVMANINSPDLHALKLLQHSVNL--CIPVVLMSEDDNVFIAMRALEDGAFLYIKKPLSME 68 
                                   5679***************999976665..5******************************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011017.457178IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.05E-7677No hitNo description
Gene3DG3DSA:3.40.50.23001.2E-10796No hitNo description
SuperFamilySSF521726.88E-11785IPR011006CheY-like superfamily
SuperFamilySSF466898.33E-15156209IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.8E-20157210IPR009057Homeodomain-like
TIGRFAMsTIGR015577.2E-19160210IPR006447Myb domain, plants
PfamPF002491.1E-7161208IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MLLSGKAKFD VVMANINSPD LHALKLLQHS VNLCIPVVLM SEDDNVFIAM RALEDGAFLY  60
IKKPLSMEFL RCLWQHVVRE KTRMVREREI YVASNNIGPV RGVEFREPAH HRDENPNPNT  120
TVMMSKGKYK SKSRGRNEEE YNSESHVMKH KGNVRRKMCT EWTQELHAKF MNAIEQLGEG  180
RCFPKEILEM MNEPGLTRMQ VASHLQKCRN DNWRSPDERK WSHHTTPQSA NSSVQTKPRR  240
FGSKPQTSYS GQNPTHTPPE TGRGSETPFK TETTNDTLPR PGSNDHFFNI LDMDGLARDF  300
SGDRQQPDIN DPARYHTPPA YNDGQSTNQV DLASSQTKSP WSSDTSNLDS DHSETKVENP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011079700.11e-118two-component response regulator ARR14-like
TrEMBLA0A4D9BEQ91e-142A0A4D9BEQ9_SALSN; Two-component response regulator ARR-B family
STRINGMigut.D00936.1.p1e-106(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384