PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100232550021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 157aa MW: 18016.1 Da PI: 9.8114 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.5 | 8.5e-11 | 136 | 157 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vk++++pr Ote100232550021|100232550021 136 LDDGYKWRKYGQKVVKNTQHPR 157 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.8E-12 | 121 | 157 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-9 | 128 | 157 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.528 | 131 | 157 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-7 | 137 | 157 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MTSATQVMVN QSLFEEQQDM IMSSQLGIFP FIQTNXXXXX XXXXXXXXXG FNQPLKTLDS 60 TDSHFSGLPQ ILSLQRSASN YWALGELSEC MGMKRGGGED DHHLGVSTMK MKKIKARRKV 120 RDPRFCFKTM SDVDVLDDGY KWRKYGQKVV KNTQHPR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011100913.2 | 8e-54 | probable WRKY transcription factor 13 | ||||
TrEMBL | A0A4D8Z7B0 | 2e-69 | A0A4D8Z7B0_SALSN; Uncharacterized protein | ||||
STRING | EOX92322 | 2e-52 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10376 | 21 | 26 |