PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100232330062 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | CAMTA | ||||||||
Protein Properties | Length: 1100aa MW: 124310 Da PI: 6.3376 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 183.6 | 2.1e-57 | 20 | 136 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevly 82 +e ++rwl++ ei++iL+n++k++++ e+++rp++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+ Ote100232330062|100232330062 20 QEaQHRWLRPAEICEILQNHHKFRIAPEPPNRPPNGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLH 100 5559***************************************************************************** PP CG-1 83 cyYahseenptfqrrcywlLeeelekivlvhylevk 118 cyYah+een++fqrr+yw+Leeel++ivlvhy+evk Ote100232330062|100232330062 101 CYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136 *********************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 85.627 | 15 | 141 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 2.1E-81 | 18 | 136 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 3.3E-50 | 21 | 134 | IPR005559 | CG-1 DNA-binding domain |
SuperFamily | SSF81296 | 1.22E-13 | 530 | 616 | IPR014756 | Immunoglobulin E-set |
SuperFamily | SSF48403 | 7.77E-11 | 700 | 770 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 1.29E-8 | 701 | 770 | No hit | No description |
Gene3D | G3DSA:1.25.40.20 | 6.2E-10 | 702 | 770 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 13.151 | 704 | 767 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF52540 | 6.11E-8 | 919 | 977 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 21 | 926 | 948 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.309 | 928 | 956 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.083 | 928 | 947 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0016 | 949 | 971 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 9.816 | 950 | 974 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 8.8E-5 | 952 | 971 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005516 | Molecular Function | calmodulin binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1100 aa Download sequence Send to blast |
MAESRRYALN AQLDIEQILQ EAQHRWLRPA EICEILQNHH KFRIAPEPPN RPPNGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWML 120 EEELSHIVLV HYREVKGNRT NFNRVRDGDS LPSSRQAEDV SNSDADSSAA SRFQSYDYQR 180 ASPITDATSL NSTLASDLED AQSAYRHQAS PIFHSIHDLQ SPSISTTVAS PTPYHPIPIS 240 SNYQGQSSAI SGMSFGPITQ GEENKSLIDS GLKYDYQQDM GFSSWGNVAE SSSASYQSVD 300 FQLSLPSTQS SAMSMMPVQD NELLDHVFSG AFTKKQEFGN HSDGLGEWQA PDGSLHMPKW 360 SIDQKSDSNL NLGQNPNHPS LRQPLLYDLA TKLNDTNQVG LSDSMGLHTA YVTDQNREPL 420 ENDLQLQALS SLKSELDGNL NAGDKANYPA PRKPLLDGVM REGLKKLDSF DRWISKELDD 480 VAESTIQSDS GVYWETVGGG DVDDSGISTQ VPSDNFVLGP SLSQDQLFSI IDFSPNWTYS 540 GSEIKVLVMG RFMKSREVAD YKWACMFGEI EVPAEVVGDG VLRCLAPSHE XXGRVPFYIT 600 CSNRLACSEV REFEFRADSD ENRLRMRFGK LLSLGSGTSQ TSFQNIDEET SQIYSKISAL 660 LKDDTEWEEM LSVTKKDEMS SDKVKDQSDQ LLQKLLKEKL HNWLLQKIAE GGKGPNVLDE 720 EGLGVLHYAA ALGYDWAIPP TIAAGVSINF RDVNGWTALH WAAYYGRAHC GLSHVRRCIF 780 WSDDRPNSNA SFRRKSRRSC SQKXXXXXXX XXYLAESSLS SHLSSLDLKD SKQSECREKA 840 VETVSERIAT PFGADDLPHG LSMKDSLAAV RNATLAAARI HQVFRVQSFQ RKQLKEYGDS 900 EYGISDERAL SLLALKTKKA GQHDEPVHAA AVRIQNKFRS WKGRKDFLLI RRQIIKIQAH 960 VRGHQVRKNY KKIIWSVGIL DKVILRWRRK GRGLSGFRSE AQAAGSSMIE TETKEDDYDF 1020 LKEGRKQSEE KFQKALARVK SMVQYPEARD QYRRLLNVVS EMQEKKAAQE MMLNNPEVDF 1080 DEDLIDIEAL LEDDSYFPIA |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00042 | PBM | Transfer from AT2G22300 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097567.1 | 0.0 | calmodulin-binding transcription activator 1-like | ||||
Refseq | XP_011097568.1 | 0.0 | calmodulin-binding transcription activator 1-like | ||||
TrEMBL | A0A4D8Z707 | 0.0 | A0A4D8Z707_SALSN; Uncharacterized protein | ||||
STRING | XP_009763882.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2230 | 21 | 46 |