PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100232330062
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family CAMTA
Protein Properties Length: 1100aa    MW: 124310 Da    PI: 6.3376
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100232330062genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1183.62.1e-57201363118
                          CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevly 82 
                                   +e ++rwl++ ei++iL+n++k++++ e+++rp++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+
  Ote100232330062|100232330062  20 QEaQHRWLRPAEICEILQNHHKFRIAPEPPNRPPNGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLH 100
                                   5559***************************************************************************** PP

                          CG-1  83 cyYahseenptfqrrcywlLeeelekivlvhylevk 118
                                   cyYah+een++fqrr+yw+Leeel++ivlvhy+evk
  Ote100232330062|100232330062 101 CYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136
                                   *********************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143785.62715141IPR005559CG-1 DNA-binding domain
SMARTSM010762.1E-8118136IPR005559CG-1 DNA-binding domain
PfamPF038593.3E-5021134IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.22E-13530616IPR014756Immunoglobulin E-set
SuperFamilySSF484037.77E-11700770IPR020683Ankyrin repeat-containing domain
CDDcd002041.29E-8701770No hitNo description
Gene3DG3DSA:1.25.40.206.2E-10702770IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029713.151704767IPR020683Ankyrin repeat-containing domain
SuperFamilySSF525406.11E-8919977IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001521926948IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.309928956IPR000048IQ motif, EF-hand binding site
PfamPF006120.083928947IPR000048IQ motif, EF-hand binding site
SMARTSM000150.0016949971IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.816950974IPR000048IQ motif, EF-hand binding site
PfamPF006128.8E-5952971IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1100 aa     Download sequence    Send to blast
MAESRRYALN AQLDIEQILQ EAQHRWLRPA EICEILQNHH KFRIAPEPPN RPPNGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWML  120
EEELSHIVLV HYREVKGNRT NFNRVRDGDS LPSSRQAEDV SNSDADSSAA SRFQSYDYQR  180
ASPITDATSL NSTLASDLED AQSAYRHQAS PIFHSIHDLQ SPSISTTVAS PTPYHPIPIS  240
SNYQGQSSAI SGMSFGPITQ GEENKSLIDS GLKYDYQQDM GFSSWGNVAE SSSASYQSVD  300
FQLSLPSTQS SAMSMMPVQD NELLDHVFSG AFTKKQEFGN HSDGLGEWQA PDGSLHMPKW  360
SIDQKSDSNL NLGQNPNHPS LRQPLLYDLA TKLNDTNQVG LSDSMGLHTA YVTDQNREPL  420
ENDLQLQALS SLKSELDGNL NAGDKANYPA PRKPLLDGVM REGLKKLDSF DRWISKELDD  480
VAESTIQSDS GVYWETVGGG DVDDSGISTQ VPSDNFVLGP SLSQDQLFSI IDFSPNWTYS  540
GSEIKVLVMG RFMKSREVAD YKWACMFGEI EVPAEVVGDG VLRCLAPSHE XXGRVPFYIT  600
CSNRLACSEV REFEFRADSD ENRLRMRFGK LLSLGSGTSQ TSFQNIDEET SQIYSKISAL  660
LKDDTEWEEM LSVTKKDEMS SDKVKDQSDQ LLQKLLKEKL HNWLLQKIAE GGKGPNVLDE  720
EGLGVLHYAA ALGYDWAIPP TIAAGVSINF RDVNGWTALH WAAYYGRAHC GLSHVRRCIF  780
WSDDRPNSNA SFRRKSRRSC SQKXXXXXXX XXYLAESSLS SHLSSLDLKD SKQSECREKA  840
VETVSERIAT PFGADDLPHG LSMKDSLAAV RNATLAAARI HQVFRVQSFQ RKQLKEYGDS  900
EYGISDERAL SLLALKTKKA GQHDEPVHAA AVRIQNKFRS WKGRKDFLLI RRQIIKIQAH  960
VRGHQVRKNY KKIIWSVGIL DKVILRWRRK GRGLSGFRSE AQAAGSSMIE TETKEDDYDF  1020
LKEGRKQSEE KFQKALARVK SMVQYPEARD QYRRLLNVVS EMQEKKAAQE MMLNNPEVDF  1080
DEDLIDIEAL LEDDSYFPIA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097567.10.0calmodulin-binding transcription activator 1-like
RefseqXP_011097568.10.0calmodulin-binding transcription activator 1-like
TrEMBLA0A4D8Z7070.0A0A4D8Z707_SALSN; Uncharacterized protein
STRINGXP_009763882.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146