PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100232330061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family CAMTA
Protein Properties Length: 814aa    MW: 91481 Da    PI: 5.0635
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100232330061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1184.21.4e-57201363118
                          CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevly 82 
                                   +e ++rwl++ ei++iL+n++k++++ e+++rp++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+
  Ote100232330061|100232330061  20 QEaQHRWLRPAEICEILQNHHKFRIAPEPPNRPPNGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLH 100
                                   5559***************************************************************************** PP

                          CG-1  83 cyYahseenptfqrrcywlLeeelekivlvhylevk 118
                                   cyYah+een++fqrr+yw+Leeel++ivlvhy+evk
  Ote100232330061|100232330061 101 CYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136
                                   *********************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143785.62715141IPR005559CG-1 DNA-binding domain
SMARTSM010762.1E-8118136IPR005559CG-1 DNA-binding domain
PfamPF038592.2E-5021134IPR005559CG-1 DNA-binding domain
SuperFamilySSF812967.7E-10553627IPR014756Immunoglobulin E-set
SuperFamilySSF484031.71E-11711783IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.6E-10712783IPR020683Ankyrin repeat-containing domain
CDDcd002042.48E-8712778No hitNo description
PROSITE profilePS5029713.283715782IPR020683Ankyrin repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 814 aa     Download sequence    Send to blast
MAESRRYALN AQLDIEQILQ EAQHRWLRPA EICEILQNHH KFRIAPEPPN RPPNGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEENE NFQRRSYWML  120
EEELSHIVLV HYREVKGNRT NFNRVRDGDS LPSSRQAEDV SNSDADSSAA SRFQSYDYQR  180
ASPITDATSL NSTLASDLED AQSAYRHQAS PIFHSIHDLQ SPSISTTVAS PTPYHPIPIS  240
SNYQGQSSAI SGMSFGPITQ GEENKSLIDS GLKYDYQQDM GFSSWGNVAE SSSASYQSVD  300
FQLSLPSTQS SAMSMMPVQD NELLDHVFSG AFTKKQEFGN HSDGLGEWQA PDGSLHMPKW  360
SIDQKSDSNL NLGQNPNHPS LRQPLLYDLA TKLNDTNQVG LSDSMGLHTA YVTDQNREPL  420
ENDLQLQALS SLKSELDGNL NAGDKANYPA PRKPLLDGVM REGLKKLDSF DRWISKELDD  480
VAESTIQSDS GVYWETVGGG DVDDSGISTQ VPSDNFVLGP SLSQDQLFSI IDFSPNWTYS  540
GSEIKRVTYF CLSHVQVLVM GRFMKSREVA DYKWACMFGE IEVPAEVVGD GVLRCLAPSH  600
EXXGRVPFYI TCSNRLACSE VREFEFRADS DENRLRMRFG KLLSLGSGTS QTSFQNIDEE  660
TSQIYSKISA LLKDDTEWEE MLSVTKKDEM SSDKVKDQSD QLLQKLLKEK LHNWLLQKIA  720
EGGKGPNVLD EEGLGVLHYA AALGYDWAIP PTIAAGVSIN FRDVNGWTAL HWAAYYGRWE  780
FLTFTYNNPF AANATFCSSV DHLHSSSLEH SFWA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097567.10.0calmodulin-binding transcription activator 1-like
RefseqXP_011097568.10.0calmodulin-binding transcription activator 1-like
TrEMBLA0A4D8Z7070.0A0A4D8Z707_SALSN; Uncharacterized protein
STRINGXP_009763882.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22302146