PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100230010081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 26028.6 Da PI: 7.4167 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 3.8e-11 | 78 | 121 | 4 | 50 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveY 50 ++ rE++RRdr+N++f eL ll + + +K +Ka+iL Av+ Ote100230010081|100230010081 78 SKACREKQRRDRLNDKFMELGALLEPG---RPPKTDKAAILVDAVRM 121 5678**********************8...89************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.525 | 74 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.19E-8 | 77 | 120 | No hit | No description |
SuperFamily | SSF47459 | 2.62E-10 | 78 | 137 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.7E-9 | 78 | 121 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.7E-5 | 80 | 131 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.9E-10 | 82 | 172 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MVSPENTNWL YDYGFEDITV PAGNFAAQNP GFSWPVQALN GSSNASVEID GSFGESDAPK 60 EIGSKKRART ESCAPSSSKA CREKQRRDRL NDKFMELGAL LEPGRPPKTD KAAILVDAVR 120 MVXXXXXXXX XXXXXXXXLQ EKIKELKAEK NELRDEKQRL KVEKEKLEQQ LKTMSAPQPG 180 FLPAPPTIPA AFAAQNQTAG NKLVPVISYP GVAMWQFMPP AAVDTSQDHV LHPPVA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097928.1 | 1e-140 | transcription factor ILR3-like | ||||
Swissprot | Q9FH37 | 1e-112 | ILR3_ARATH; Transcription factor ILR3 | ||||
TrEMBL | A0A0F6MTY0 | 1e-143 | A0A0F6MTY0_SALMI; BHLH3 protein | ||||
STRING | Migut.M01814.1.p | 1e-135 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA950 | 24 | 82 |