PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100228890041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | GeBP | ||||||||
Protein Properties | Length: 233aa MW: 26521.5 Da PI: 9.4039 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 57.9 | 2.8e-18 | 46 | 111 | 2 | 68 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkk 68 +f+r+w+e Dei +LqGl+d+ ++ d+ fy +++ +s ++ksql+eK+rrL+kKf+ + Ote100228890041|100228890041 46 KFHRIWTEPDEIQFLQGLLDCSLQNL-AFPRDLGIFYARFSGTMSQPYTKSQLSEKLRRLRKKFRVE 111 699******************66655.6678*********************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.0E-18 | 47 | 113 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MDSTLIQPHN NNPSSSKLPI KRKXXXXXXX XXXXPDSIAD GTPPFKFHRI WTEPDEIQFL 60 QGLLDCSLQN LAFPRDLGIF YARFSGTMSQ PYTKSQLSEK LRRLRKKFRV EFSPTLPAAT 120 TGFAQENGGS LELLDHGGKD NNGDEFKLRD DASEEKWRQN VDFRCENEIG QVAAKAVRRD 180 TCKFGSKEFF VYTVAALADF ALKSRKLPMK DSCFYAQLSL NLAKIAYTLK ITF |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12822 | 19 | 21 |