PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100228740021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Dof | ||||||||
Protein Properties | Length: 239aa MW: 26375.4 Da PI: 8.7328 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 72.7 | 5.1e-23 | 29 | 64 | 26 | 61 |
zf-Dof 26 lsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 lsqPr+fCk+C+ryWt+GG+lrnvPvGgg+rknkk Ote100228740021|100228740021 29 LSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKKF 64 79********************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 17.895 | 9 | 63 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 5.0E-14 | 29 | 63 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.4E-18 | 29 | 63 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MERSTSDPLP XXXXXXXXXX XXXXXXXXLS QPRHFCKSCK RYWTRGGTLR NVPVGGGCRK 60 NKKFKRHPTS NGGGADSKTA LAKPFSLQPS IDNPSPSYNP INNTYFHSFP TELNFPFSAT 120 RVSSESPRFD DLRGPGSGFS VSPDYRNHAY EQNIGSSSFG PSPAMATLQR FAACDELSSL 180 VVGNGEIGKE TTMFEGEVCA NNQIEKIQXX XXXXXXXXVW NSNSVGVWFD PSSSVPSLI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020554179.1 | 6e-32 | LOW QUALITY PROTEIN: dof zinc finger protein DOF1.4-like | ||||
TrEMBL | A0A2G9G7Z7 | 2e-28 | A0A2G9G7Z7_9LAMI; Uncharacterized protein | ||||
STRING | Gorai.010G155200.1 | 2e-24 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |