PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100227500191 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 22156.9 Da PI: 4.4228 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.4 | 8e-06 | 44 | 83 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Ote100227500191|100227500191 44 RREKISKKMKCLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 83 9*****************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.573 | 32 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-5 | 39 | 88 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.23E-6 | 44 | 87 | No hit | No description |
SuperFamily | SSF47459 | 3.01E-12 | 45 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.3E-14 | 45 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence Send to blast |
MQLDVEEETE EGAAEEKSDI TTKTERENSG NTSSKGSLKA SEARREKISK KMKCLQDLVP 60 GCNKVTGKAG MLDEIINYVQ SLQKQVEFLS MKLATVNPRL DFSIDNLFAK EIPAYVASLP 120 SAQMEATNPA CFQYNPMQLG IEVAIDQSQS QSQSHQTVSP KPGSSSLPIP EVFIDPSCIS 180 QLQQLSGWES DWQNLFSTGF Q |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flagellin, jasmonic acid (JA), brassinosteroid and cytokinin, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087, ECO:0000269|PubMed:12679534}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099632.1 | 3e-93 | transcription factor BEE 2 | ||||
Swissprot | Q93VJ4 | 4e-38 | BEE2_ARATH; Transcription factor BEE 2 | ||||
TrEMBL | A0A022QLX6 | 5e-76 | A0A022QLX6_ERYGU; Uncharacterized protein | ||||
STRING | Migut.O00889.1.p | 9e-77 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4000 | 21 | 42 |
Publications ? help Back to Top | |||
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