PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100227420081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 257aa MW: 28895.3 Da PI: 7.663 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.8 | 4.1e-08 | 146 | 193 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +iN+++ L++++P + k + a +L + ++Y++sLq Ote100227420081|100227420081 146 SHSLAERVRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 193 8*************************9....35599999**********998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.88E-16 | 140 | 210 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.41E-9 | 140 | 196 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.1E-15 | 142 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.097 | 142 | 192 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.7E-5 | 146 | 193 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.2E-8 | 148 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006351 | Biological Process | transcription, DNA-templated | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MADHQFFETF KHSFSLADID SDVEIINYLS GLYQNDRDWS SALSFHHNSM NVENMNGVFV 60 NAENGALTPT QPIISSKERK RKANDIDTTC ANTSPHSSPQ VSDNSGSRKT RRGGRGKKAT 120 RSNEKEGEKP REVIHVRAKR GQATDSHSLA ERVRRGKINE RLRCLQDIVP GCYKTMGMAV 180 MLDEIINYVQ SLQNQVDFLS MKLTAASSFY DFNTETDAIE AMQRANAFEA MKIEDVAFPS 240 AQLAQNLGYY PPQLPHK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive regulator of brassinosteroid signaling. {ECO:0000269|PubMed:12454087}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269|PubMed:12454087}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011080441.1 | 8e-93 | transcription factor BEE 1-like | ||||
Swissprot | Q8GWK7 | 2e-59 | BEE3_ARATH; Transcription factor BEE 3 | ||||
TrEMBL | A0A2G9GHD7 | 6e-86 | A0A2G9GHD7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.D00641.1.p | 4e-84 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3971 | 23 | 44 |
Publications ? help Back to Top | |||
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