PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100224590091
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 332aa    MW: 37486.5 Da    PI: 6.4025
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100224590091genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.36.6e-087798526
                                  CHHHCHHHHHHHHHHHHHHHHH CS
                        bZIP_1  5 krerrkqkNReAArrsRqRKka 26
                                  k +rr+++NReAAr+sR+RKk 
  Ote100224590091|100224590091 77 KIQRRLAQNREAARKSRLRKKG 98
                                  779*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.7E-674124No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141441.9E-26133207IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTTPSTQFAP SSRLGLYEPL HQISMWEDTY NGNISPGSGV CMITEVDSKI DDKIEYGSDK  60
SQELAEETRA SRSISEKIQR RLAQNREAAR KSRLRKKGLI MNAHMGLCGT TYSGTAAFEI  120
EYSHWIDEQE RKITELRNML QTPIGDAELR LKVESVLSHY CDLFQMKRDA ARADAFYLVS  180
GMWRTSVERF FLWIGGFKPS ELINVVMPQL QPLNEQQTAN VETLRHSCVQ AEDALSQGME  240
KLQQTLAQTV TFLAPGPGNY CSQTAFALEN LESLEGFINQ ADHLRQQTLQ HMARILSTRQ  300
AANGLVAFGE YFQRLRTLSS LWSARSPCEP AC
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097899.10.0transcription factor TGA4 isoform X2
RefseqXP_011097907.10.0transcription factor TGA1 isoform X3
SwissprotQ93ZE21e-124TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A4D8ZUK40.0A0A4D8ZUK4_SALSN; Transcription factor TGA
STRINGMigut.C00214.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]