PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100223980021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | MYB_related | ||||||||
Protein Properties | Length: 595aa MW: 62983.8 Da PI: 7.1334 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.2 | 1.8e-08 | 204 | 232 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 r +WT eEd +l+ v+++G ++W+ Iar Ote100223980021|100223980021 204 RRAWTLEEDTKLAASVQKHGERNWANIAR 232 679************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.613 | 199 | 256 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.4E-10 | 200 | 255 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 4.45E-11 | 201 | 254 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 1.0E-5 | 203 | 254 | IPR001005 | SANT/Myb domain |
CDD | cd11660 | 7.22E-9 | 205 | 253 | No hit | No description |
Pfam | PF13921 | 7.1E-7 | 207 | 254 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 595 aa Download sequence Send to blast |
MVDKSKKAKK GTISEEDVSV LLQRYSMNTV LGLLQEVEQA GGEKIDWREV ARNSATGISN 60 AREYQMLWRH IAYGETLINQ VDDDAEPVDD DSDLDHELDA FPAVGREASG EAAACVKVLI 120 ASGYPNNSNL PNNSTIEAPL TINVPCSKAV SASSDGSLLP NTIHGKNVSI PVPVQKQPLS 180 SGVIGEKRPH NEVSEVNLPN RRRRRAWTLE EDTKLAASVQ KHGERNWANI ARWDFKNDRR 240 ASELSQRWSS LRKKQGNTKA GPSSQPSETQ LAATHRALSM ALDMPMGDNL KSAAHMNAAG 300 IKIQHQPPKA SASTADQQFQ RAGPSKPQML ANRPTINTVS ERDSMVKAAA VAAGARIATP 360 ADASSLIEAA RSQNVVHITT GGSSVIKPST ANIGHQLPSN VHFIRNGLAK APISTFAAPK 420 PSIPVTGEAK TSQSXXXXXX XXXXXXATAV PNPVAAVPAS NTTSLKENTA ASTPSTKRPE 480 TANNGAVSIS DNEKKEPENQ PAAASGNESE VGNNPPSSSG DSLKENTEGE GASINVSEPI 540 SRATDGVIPL PSSKVENDGK TGTDDQKTSE KTAANPRSNG KSEDLPGKSA DGPAI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082058.1 | 0.0 | uncharacterized protein LOC105164926 | ||||
TrEMBL | A0A4D9AYB3 | 0.0 | A0A4D9AYB3_SALSN; Uncharacterized protein | ||||
STRING | Migut.A00432.1.p | 1e-166 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3434 | 22 | 37 |