PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100223980021
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family MYB_related
Protein Properties Length: 595aa    MW: 62983.8 Da    PI: 7.1334
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100223980021genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.8e-08204232129
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                                   r +WT eEd +l+  v+++G ++W+ Iar
  Ote100223980021|100223980021 204 RRAWTLEEDTKLAASVQKHGERNWANIAR 232
                                   679************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.613199256IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-10200255IPR009057Homeodomain-like
SuperFamilySSF466894.45E-11201254IPR009057Homeodomain-like
SMARTSM007171.0E-5203254IPR001005SANT/Myb domain
CDDcd116607.22E-9205253No hitNo description
PfamPF139217.1E-7207254No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MVDKSKKAKK GTISEEDVSV LLQRYSMNTV LGLLQEVEQA GGEKIDWREV ARNSATGISN  60
AREYQMLWRH IAYGETLINQ VDDDAEPVDD DSDLDHELDA FPAVGREASG EAAACVKVLI  120
ASGYPNNSNL PNNSTIEAPL TINVPCSKAV SASSDGSLLP NTIHGKNVSI PVPVQKQPLS  180
SGVIGEKRPH NEVSEVNLPN RRRRRAWTLE EDTKLAASVQ KHGERNWANI ARWDFKNDRR  240
ASELSQRWSS LRKKQGNTKA GPSSQPSETQ LAATHRALSM ALDMPMGDNL KSAAHMNAAG  300
IKIQHQPPKA SASTADQQFQ RAGPSKPQML ANRPTINTVS ERDSMVKAAA VAAGARIATP  360
ADASSLIEAA RSQNVVHITT GGSSVIKPST ANIGHQLPSN VHFIRNGLAK APISTFAAPK  420
PSIPVTGEAK TSQSXXXXXX XXXXXXATAV PNPVAAVPAS NTTSLKENTA ASTPSTKRPE  480
TANNGAVSIS DNEKKEPENQ PAAASGNESE VGNNPPSSSG DSLKENTEGE GASINVSEPI  540
SRATDGVIPL PSSKVENDGK TGTDDQKTSE KTAANPRSNG KSEDLPGKSA DGPAI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082058.10.0uncharacterized protein LOC105164926
TrEMBLA0A4D9AYB30.0A0A4D9AYB3_SALSN; Uncharacterized protein
STRINGMigut.A00432.1.p1e-166(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34342237