PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100221470051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 322aa MW: 35267.6 Da PI: 7.1705 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.9 | 4.8e-15 | 45 | 94 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lrel+P++ ++K + a+ L ++++Y++ Lq Ote100221470051|100221470051 45 RSKHSVTEQRRRSKINERFQILRELIPHS----DQKRDTASFLLEVIQYVQFLQ 94 889*************************9....8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.7E-18 | 41 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.7E-22 | 42 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.929 | 43 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.22E-15 | 45 | 98 | No hit | No description |
Pfam | PF00010 | 2.3E-12 | 45 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.7E-11 | 49 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MKSGKGHXXX XXXXXXXFGA KKDATSSANN SKADGKSSDK ANAVRSKHSV TEQRRRSKIN 60 ERFQILRELI PHSDQKRDTA SFLLEVIQYV QFLQEKVQKY EGSYQPWNSE PTKLMPWLLT 120 FPNIFSEQRN SHWRVQNFVG QKNGSGPGST FPGRFDENNG AVESDHSRDG PSRPLNPHTE 180 LPNKSMSMPF PIPVSMANDG CFSHTLHGLP TSDAQSAECP ITVDGMNHQD DLTIEGGTIS 240 VSSVYSEGLL SALTQALESA SIDLSQASIS VQINLGKRAN IGGAPENAIA KDHVIAAPSN 300 NQAYHDGASS EDLDLAHKRP KT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive brassinosteroid-signaling protein. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027151691.1 | 1e-131 | transcription factor BIM2 isoform X1 | ||||
Refseq | XP_027151692.1 | 1e-131 | transcription factor BIM2 isoform X2 | ||||
Swissprot | Q9CAA4 | 1e-88 | BIM2_ARATH; Transcription factor BIM2 | ||||
TrEMBL | A0A0H3Y8Y9 | 1e-162 | A0A0H3Y8Y9_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.L01158.1.p | 1e-121 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4426 | 23 | 37 |
Publications ? help Back to Top | |||
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