PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100221390121 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | Trihelix | ||||||||
Protein Properties | Length: 189aa MW: 22232.9 Da PI: 9.9093 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 39.8 | 1.2e-12 | 1 | 47 | 38 | 86 |
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 m+e gf+r+p+qCk+kw+nl +ryk ++++++ + ++ +p++++++ Ote100221390121|100221390121 1 MSEIGFTRTPVQCKSKWKNLVTRYKGCETMQEIEMRQQ--VFPFYNEMK 47 789***************************99865444..5******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 3.2E-9 | 1 | 48 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
MSEIGFTRTP VQCKSKWKNL VTRYKGCETM QEIEMRQQVF PFYNEMKTIF NSRMQRMQCL 60 QEAEGAAATS SPQIPSCDDG GRERKKRKEK RSSSSTKVEG LKEVMEEYMR QQMEMEKQWI 120 KAYXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VRRDALITAL 180 LNKIGRDGI |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4187 | 23 | 43 |