PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100218550061 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 304aa MW: 33698.6 Da PI: 7.3444 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31 | 4.4e-10 | 218 | 259 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++RR+ri +++ +L+el+P+ K++ +++LekA+ Y+k Lq Ote100218550061|100218550061 218 AKNRRERISERLKTLQELVPNG-----SKVDLVTMLEKAISYVKFLQ 259 69*******************5.....5******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.142 | 209 | 258 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.14E-13 | 211 | 268 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.0E-12 | 213 | 267 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.38E-11 | 215 | 263 | No hit | No description |
SMART | SM00353 | 4.0E-12 | 215 | 264 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.3E-7 | 219 | 259 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence Send to blast |
MALANKEHLK NEGAGAAMAI IQGSTFYDQD FRGPSLIQNS SHIYGVHGEP DSPEKAAKMS 60 YSSAVSSPSS TNSCGLGYCV AEEDNSIIMF KPNFIHANAG SLLSFDQNKT MLNTKMISEE 120 DEYPTWEGQH HLHYVNHGPP ENSRXXXXXX XXXXXXXXXX XAEQWAWQEA TGAQEITGQE 180 ATINKRHSTG ENLQALKKQC VNKKPKHKAA ADPQSVAAKN RRERISERLK TLQELVPNGS 240 KVDLVTMLEK AISYVKFLQL QVKVLAADEF WPVQGGKAPD LSQVREAIDA ILATQRDRRS 300 SSSK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099478.1 | 2e-84 | putative transcription factor bHLH086 | ||||
TrEMBL | A0A0H3YBW4 | 4e-90 | A0A0H3YBW4_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.H00272.1.p | 1e-77 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9986 | 21 | 26 |