PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100218550061
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 304aa    MW: 33698.6 Da    PI: 7.3444
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100218550061genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.4e-10218259955
                                   HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    ++RR+ri +++ +L+el+P+       K++ +++LekA+ Y+k Lq
  Ote100218550061|100218550061 218 AKNRRERISERLKTLQELVPNG-----SKVDLVTMLEKAISYVKFLQ 259
                                   69*******************5.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.142209258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.14E-13211268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-12213267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.38E-11215263No hitNo description
SMARTSM003534.0E-12215264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-7219259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MALANKEHLK NEGAGAAMAI IQGSTFYDQD FRGPSLIQNS SHIYGVHGEP DSPEKAAKMS  60
YSSAVSSPSS TNSCGLGYCV AEEDNSIIMF KPNFIHANAG SLLSFDQNKT MLNTKMISEE  120
DEYPTWEGQH HLHYVNHGPP ENSRXXXXXX XXXXXXXXXX XAEQWAWQEA TGAQEITGQE  180
ATINKRHSTG ENLQALKKQC VNKKPKHKAA ADPQSVAAKN RRERISERLK TLQELVPNGS  240
KVDLVTMLEK AISYVKFLQL QVKVLAADEF WPVQGGKAPD LSQVREAIDA ILATQRDRRS  300
SSSK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099478.12e-84putative transcription factor bHLH086
TrEMBLA0A0H3YBW44e-90A0A0H3YBW4_SALMI; Basic helix-loop-helix transcription factor
STRINGMigut.H00272.1.p1e-77(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99862126