PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100210250011

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

SAP

Protein Properties

Length: 331aa MW: 37914.8 Da PI: 9.1026

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100210250011	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	434.6	8.6e-133	1	273	79	354
SAP 79 vcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclals 159 vcstwra+s s+llwq+ltrriW+ +l r tWreeyiyrhrt++nfr+rry ++tl f p+ dn+++ lsCr+la+s Ote100210250011\|100210250011 1 VCSTWRAISLSELLWQNLTRRIWNTDHLRRRTWREEYIYRHRTSSNFRHRRYLHTTLPFIPT----DNNNNGLSCRRLAIS 77 8**********************************************************8....445579***** PP SAP 160 dkyl...aaGfadGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarral 237 + f+dGavrlf+l ++lh++tf+pqh drlGrfs++vsGi++sd rlvfatldG+ih a+ dg a+ rra Ote100210250011\|100210250011 78 EXXXxxxXXXFSDGAVRLFHLPSQLHLTTFYPQHIDRLGRFSSSVSGIILSDVRLVFATLDGNIHAAAFDG--GAPLRRAN 156 9865111578********************************************************9..57** PP SAP 238 lGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretava 318 +GdvvndGalvdf+Gs+rWwvGlyaGvpGrafhiW+++teel f+GG+ltdPeavmGWh+lte+t+l+Grvr+t +e ava Ote100210250011\|100210250011 157 VGDVVNDGALVDFSGSDRWWVGLYAGVPGRAFHIWNGDTEELLFIGGTLTDPEAVMGWHLLTEITDLIGRVRLTTHENAVA 237 ***************************************************************************** PP SAP 319 CtslrlvvfdlrnqgvvlreeeerrGlivssldasn 354 Ct++rl+ fdlrnqgvvl++e+ +rG+ v+++da Ote100210250011\|100210250011 238 CTNSRLMLFDLRNQGVVLHQEDLHRGVAVGCFDAXX 273 *******************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF81383	5.45E-5	1	43	IPR001810	F-box domain
Gene3D	G3DSA:1.20.1280.50	2.5E-6	1	65	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
VCSTWRAISL SELLWQNLTR RIWNTDHLRR RTWREEYIYR HRTSSNFRHR RYLHTTLPFI 60 PTDNNNNGLS CRRLAISEXX XXXXXXXFSD GAVRLFHLPS QLHLTTFYPQ HIDRLGRFSS 120 SVSGIILSDV RLVFATLDGN IHAAAFDGGA PLRRANVGDV VNDGALVDFS GSDRWWVGLY 180 AGVPGRAFHI WNGDTEELLF IGGTLTDPEA VMGWHLLTEI TDLIGRVRLT THENAVACTN 240 SRLMLFDLRN QGVVLHQEDL HRGVAVGCFD AXXXXXXXXX XXXXXXADRR PRRRQRASAG 300 RSDGGVQIPR ERRECGVREH WIWSGERGRC D

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022861007.1	1e-132	transcriptional regulator STERILE APETALA-like isoform X1
Refseq	XP_022861009.1	1e-132	transcriptional regulator STERILE APETALA-like isoform X2
Swissprot	Q9FKH1	4e-99	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A2G9G769	1e-139	A0A2G9G769_9LAMI; Uncharacterized protein
STRING	Migut.K00325.1.p	1e-124	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4099	23	45

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]