PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100206730021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

C2H2

Protein Properties

Length: 287aa MW: 32911.4 Da PI: 7.9906

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100206730021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	103	126	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++C+k+F+ +L +H + H Ote100206730021\|100206730021 103 WRCGYCKKVFRAEKYLDQHFDNrH 126 58*****************77666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE pattern	PS00028	0	105	126	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence Send to blast
MEKTRPIYRI CLLIALHLSF AASQSEIAQD TNVAASRNHK EEHHEVHCSR ERSRAAWKIL 60 EEYLTPFVEK EKYQLSSRCR LHPSNDLFRD QEQHKIHVDI NEWRCGYCKK VFRAEKYLDQ 120 HFDNRHNNLL NVSHGKCLAD LCGALHCDYV INSQSRPSKC NPAAAARNRH LCEDLANNCF 180 PMNEGPSVTR LHEFFLRQFC DAHTCSKAGG KPFSRGGMVS EEYKHIVSGD FSTDFDVPSY 240 ILLDRLLVPE RNEKGHDAAK AHLKAQEKTK ALLIAFGKLL GIIHCDN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012854614.1	1e-120	PREDICTED: uncharacterized protein LOC105974100
TrEMBL	A0A4D8ZKG3	1e-132	A0A4D8ZKG3_SALSN; Uncharacterized protein
STRING	Migut.I00466.1.p	1e-116	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8084	12	16