PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100205730021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 230aa MW: 25417.4 Da PI: 7.0742 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32.6 | 2.4e-10 | 3 | 37 | 96 | 128 |
NAM 96 kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Ote100205730021|100205730021 3 NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 37 67899*********5547999999*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.626 | 1 | 56 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.81E-13 | 3 | 56 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MVNGKQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGQH EEEKEGELVV SKIFYQTQPR 60 QCNWSERTAA AVAGDADANL RRESGSGSCS SSKEIMPQRD DFSSAAIAGG AAPIPTYAGL 120 DIHQLKADHF GYLPFRKSFD NEAGNIGEAS LAREAAAGTC EERDMGQHHV THEQHQQIAA 180 AAATAFHISR PSHSISTIIS PAPLHHTSII LDQDHPFHVP RIMLPNENFQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020549346.1 | 1e-112 | uncharacterized protein LOC105162027 isoform X2 | ||||
Refseq | XP_020549347.1 | 1e-112 | uncharacterized protein LOC105162027 isoform X3 | ||||
Swissprot | Q9M0F8 | 4e-58 | NAC75_ARATH; NAC domain-containing protein 75 | ||||
TrEMBL | A0A2Z7BSZ3 | 1e-113 | A0A2Z7BSZ3_9LAMI; NAC domain-containing protein 8 | ||||
STRING | VIT_11s0016g02880.t01 | 1e-101 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4057 | 24 | 44 |
Publications ? help Back to Top | |||
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