PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100204950011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 200aa MW: 22799.1 Da PI: 9.2789 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.5 | 4.3e-26 | 14 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrF+Ptdee+v +yL++k+ + +l++ +vi+e i++++ ++Lp +++ y F++r+ a ++ nr++ g Ote100204950011|100204950011 14 LPPGFRFQPTDEEIVFQYLARKIFSCPLPA-SVIPE--IHDFHLSNLP------DRDRYLFARRELIDA--RNVNRSICIG 83 79***************************9.88998..7889999**9......5789****9998765..5899*99*** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wk tg++k+++++ k +vg+++tLvfykg++p++++td +mh y + Ote100204950011|100204950011 84 FWKVTGSEKRIVCSkKMPVVGIRRTLVFYKGKHPHAVRTDRFMHVYCI 131 **********9997355569************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.92E-32 | 11 | 162 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 32.146 | 14 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-16 | 15 | 130 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MNKFNFIRDG ETKLPPGFRF QPTDEEIVFQ YLARKIFSCP LPASVIPEIH DFHLSNLPDR 60 DRYLFARREL IDARNVNRSI CIGFWKVTGS EKRIVCSKKM PVVGIRRTLV FYKGKHPHAV 120 RTDRFMHVYC IAISENSVHH KRHSQGGLIQ IGKWVLCHVF SKKRGVEADG YDHLEMSDTD 180 SCSSDSSGSS VPSEVSSSSV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-25 | 9 | 167 | 10 | 173 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011073111.1 | 1e-81 | NAC domain-containing protein 83 | ||||
TrEMBL | A0A4D8Y7E8 | 4e-77 | A0A4D8Y7E8_SALSN; Uncharacterized protein | ||||
STRING | XP_009597132.1 | 3e-60 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1387 | 23 | 77 |