PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100203820021

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

ARR-B

Protein Properties

Length: 438aa MW: 50762 Da PI: 7.2581

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100203820021	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	67.8	1.8e-21	233	281	5	54
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt+eLH++F++aveqL G+ + Pk+ile+m+ +gLt+ +v+SHLQk R Ote100203820021\|100203820021 233 EWTQELHAKFMNAVEQL-GEGRCFPKEILEMMNEPGLTRMQVASHLQKCR 281 7**************.9***************************98 PP
2	Response_reg	32.1	6e-12	33	137	2	107
EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS Response_reg 2 livdDeplvrellrqalekegyeevaeaddgeealellkekd...pDlillDiempgmdGlellkeireeepklpiivvta 79 l+vd +p + + l+ ++ +v +d + +a+ +l ++ +D+++ i+ + +G++ll++ + + +p++ +++ Ote100203820021\|100203820021 33 LLVDHDPETLIHTVNQLQMCQC-RVSYVDVALAAIPMLLSHEkakFDVVMANINSHDPNGYKLLQHALN--MCIPVVWMSD 110 899*************99.*********99994444456**************996544..67**** PP TTTHHHHHHHHHTTESEEEESS--HHHH CS Response_reg 80 hgeeedalealkaGakdflsKpfdpeel 107 ++ ++a++al+ Ga ++ Kp +p e Ote100203820021\|100203820021 111 DDNTSMAVRALENGAFICIKKP-PPMEF 137 ********************.76665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF52172	3.42E-15	29	153	IPR011006	CheY-like superfamily
SMART	SM00448	2.0E-5	30	141	IPR001789	Signal transduction response regulator, receiver domain
Gene3D	G3DSA:3.40.50.2300	2.5E-15	30	156	No hit	No description
PROSITE profile	PS50110	21.109	31	146	IPR001789	Signal transduction response regulator, receiver domain
Pfam	PF00072	5.3E-7	33	134	IPR001789	Signal transduction response regulator, receiver domain
CDD	cd00156	5.13E-9	33	146	No hit	No description
PROSITE profile	PS51294	9.255	224	285	IPR017930	Myb domain
SuperFamily	SSF46689	5.08E-15	228	281	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.5E-20	229	282	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.2E-19	232	282	IPR006447	Myb domain, plants
Pfam	PF00249	3.9E-8	233	280	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000160	Biological Process	phosphorelay signal transduction system
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence Send to blast
MMMWELGNFW TERVNSVPMA SSVHPMVHEI HALLVDHDPE TLIHTVNQLQ MCQCRVSYVD 60 VALAAIPMLL SHEKAKFDVV MANINSHDPN GYKLLQHALN MCIPVVWMSD DDNTSMAVRA 120 LENGAFICIK KPPPMEFLKC LWQHVIREKT RMLRERDMFV ATNNLGPARG VEFRDVLXXX 180 XXXXXXXXFM RMKNKGKHRN KCRGRHDYYD DDYDSDNNIV SQTGSVRRKM CTEWTQELHA 240 KFMNAVEQLG EGRCFPKEIL EMMNEPGLTR MQVASHLQKC RNDNWRSPEE RKPTSQQSAG 300 QQSIRSQSKI RRFGSMPLPN KPSTSSSQIH WEAQTPKHYG TNDYFNFPDM DSLIRDFSGR 360 QQEPDISNPT QPQGGYQVDP TYNDHDQXXX XXXXXXXXXX XXXXXXXXXX XISAIIDRLM 420 YIYMQNSGEA SMKTKSHD

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence Send to blast

MMMWELGNFW TERVNSVPMA SSVHPMVHEI HALLVDHDPE TLIHTVNQLQ MCQCRVSYVD  60
VALAAIPMLL SHEKAKFDVV MANINSHDPN GYKLLQHALN MCIPVVWMSD DDNTSMAVRA  120
LENGAFICIK KPPPMEFLKC LWQHVIREKT RMLRERDMFV ATNNLGPARG VEFRDVLXXX  180
XXXXXXXXFM RMKNKGKHRN KCRGRHDYYD DDYDSDNNIV SQTGSVRRKM CTEWTQELHA  240
KFMNAVEQLG EGRCFPKEIL EMMNEPGLTR MQVASHLQKC RNDNWRSPEE RKPTSQQSAG  300
QQSIRSQSKI RRFGSMPLPN KPSTSSSQIH WEAQTPKHYG TNDYFNFPDM DSLIRDFSGR  360
QQEPDISNPT QPQGGYQVDP TYNDHDQXXX XXXXXXXXXX XXXXXXXXXX XISAIIDRLM  420
YIYMQNSGEA SMKTKSHD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011079700.1	1e-122	two-component response regulator ARR14-like
TrEMBL	A0A4D9BEQ9	1e-124	A0A4D9BEQ9_SALSN; Two-component response regulator ARR-B family
STRING	Migut.D00936.1.p	1e-104	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA813	23	84