PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100203500011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 26485.5 Da PI: 8.1473 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 99.4 | 5.1e-31 | 5 | 77 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ekewyfFs+r++ky++g+r+nra+ sgyWkatg dk++ + ++vg+kk Lvfy+g+ap+gekt+W+mheyrl Ote100203500011|100203500011 5 GEKEWYFFSPRERKYPNGSRPNRAAGSGYWKATGADKPIGQ--PKTVGIKKALVFYSGKAPRGEKTNWIMHEYRL 77 579************************************98..778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 41.454 | 1 | 104 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.23E-36 | 3 | 104 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-15 | 9 | 77 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
LALYGEKEWY FFSPRERKYP NGSRPNRAAG SGYWKATGAD KPIGQPKTVG IKKALVFYSG 60 KAPRGEKTNW IMHEYRLADV DRSARKKINS LRLDDWVLCR IYNKKGTIXX XXXXXXXXXX 120 XXRPMTSVVT SDEDTKPVIL TSVPESSAMV YDDFMYLDPS DSIPRLPTDS SCSEHVLSPE 180 VESAPKLSEW EKSTLFPFGY MDAAEGGGAL MGSQFQANYP AMNDDVFAPY MSKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-48 | 2 | 105 | 64 | 169 | Stress-induced transcription factor NAC1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011069419.1 | 1e-123 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 6e-83 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2G9HHN7 | 1e-122 | A0A2G9HHN7_9LAMI; Uncharacterized protein | ||||
STRING | Migut.C01110.1.p | 1e-114 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1239 | 24 | 81 |