PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100202600021 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | bHLH | ||||||||
Protein Properties | Length: 258aa MW: 28933.3 Da PI: 6.1619 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.7 | 5.7e-10 | 143 | 190 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k + Ka +L + ++Y++sLq Ote100202600021|100202600021 143 SHSLAERARREKISERMKILQDLVPGC----NKVVGKALVLDEIINYVQSLQ 190 8*************************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.21E-9 | 137 | 194 | No hit | No description |
SuperFamily | SSF47459 | 3.4E-17 | 137 | 206 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.605 | 139 | 189 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.6E-17 | 139 | 206 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.6E-7 | 143 | 190 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.5E-10 | 145 | 195 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MDHQGAEMMN GAGGGDVYNF GQIWPRFQMN VNARSYGLGM DPMPTDQRSN DNSRKRRDED 60 ERCAKGGGGA SXXXXXXXXX XXXXXXVSSE GKNEDDSKRL KAVGENKGEV DSGKVVERRT 120 NPDEQPKQDY IHVRARRGQA TDSHSLAERA RREKISERMK ILQDLVPGCN KVVGKALVLD 180 EIINYVQSLQ RQVEFLSMKL ETVNARGEID EYPSKDFAQQ SFEAPPMASF GSQSTREYRG 240 SSPEWLHMQI GSGFDQAS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011071046.1 | 1e-121 | transcription factor bHLH79-like | ||||
Swissprot | Q69WS3 | 5e-66 | BH094_ORYSJ; Transcription factor BHLH094 | ||||
TrEMBL | A0A0H3YBV3 | 1e-123 | A0A0H3YBV3_SALMI; Basic helix-loop-helix transcription factor | ||||
STRING | Migut.L01368.1.p | 1e-108 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1287 | 24 | 71 |