PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100202530081 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WOX | ||||||||
Protein Properties | Length: 205aa MW: 23807.6 Da PI: 8.8862 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.9 | 2.7e-21 | 13 | 72 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq++ Le+l+++ r+p+ae++++++++l +++ ++V++WFqN++a++++ Ote100202530081|100202530081 13 SRWNPTKEQINMLESLYKQgLRTPTAEQIQQITARLrdfgHIEGKNVFYWFQNHKARQRQ 72 6*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 115.7 | 2.3e-37 | 13 | 74 | 4 | 65 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +RW+Pt+eQi++Le+lyk+GlrtP++e+iq+ita+L+ +G+ie+kNVfyWFQN+kaR+rqkq Ote100202530081|100202530081 13 SRWNPTKEQINMLESLYKQGLRTPTAEQIQQITARLRDFGHIEGKNVFYWFQNHKARQRQKQ 74 8***********************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 9.41E-14 | 9 | 81 | IPR009057 | Homeodomain-like |
SMART | SM00389 | 8.5E-5 | 10 | 77 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 1.0E-8 | 13 | 72 | IPR009057 | Homeodomain-like |
Pfam | PF00046 | 5.8E-19 | 13 | 72 | IPR001356 | Homeobox domain |
CDD | cd00086 | 2.58E-6 | 14 | 74 | No hit | No description |
PROSITE profile | PS50071 | 10.754 | 18 | 73 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008284 | Biological Process | positive regulation of cell proliferation | ||||
GO:0009942 | Biological Process | longitudinal axis specification | ||||
GO:0010654 | Biological Process | apical cell fate commitment | ||||
GO:0048825 | Biological Process | cotyledon development | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0090451 | Biological Process | cotyledon boundary formation | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MEGGDQTLGN GGSRWNPTKE QINMLESLYK QGLRTPTAEQ IQQITARLRD FGHIEGKNVF 60 YWFQNHKARQ RQKQKQESFA FYNRFLHASP VFSPYQKVVC SPCYIPPLKN DQVFYHQQAK 120 VPLPTASCSF KRSRMTPERS DPTRYNTNMH SFSTPRNSSI HHQETLDLFP IHPTGVVQQQ 180 TDDDIKNPNF GDADDRPFFD FFCGN |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077272.1 | 3e-82 | WUSCHEL-related homeobox 2 | ||||
TrEMBL | A0A4D9BTG5 | 3e-85 | A0A4D9BTG5_SALSN; Uncharacterized protein | ||||
STRING | Migut.F01969.1.p | 1e-67 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11414 | 19 | 25 |