PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100200710011 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | MYB_related | ||||||||
Protein Properties | Length: 177aa MW: 19793.9 Da PI: 9.9556 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46 | 1.2e-14 | 65 | 109 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++lG+g+W+ I+r + +Rt+ q+ s+ qky Ote100200710011|100200710011 65 PWTEEEHRRFLMGLEKLGKGDWRGISRNFVSTRTPTQVASHAQKY 109 8*****************************9*************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 19.552 | 58 | 114 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.14E-18 | 59 | 115 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.7E-18 | 62 | 113 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 3.4E-12 | 62 | 108 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 2.5E-11 | 62 | 112 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.67E-10 | 65 | 110 | No hit | No description |
Pfam | PF00249 | 2.1E-12 | 65 | 109 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
GGGGVIKLFG VQLDISSSIP IKKSFSFDCS LTXXXXXXXX XXTNKSSLGY HSDHAPPSHT 60 RKGVPWTEEE HRRFLMGLEK LGKGDWRGIS RNFVSTRTPT QVASHAQKYF LRQSSIHNKK 120 RRSSLFDMAG GSEQSXXXXX XXXXXXXCVD DFPMELELTL SAHHQSSSSL FPPITVT |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00565 | DAP | Transfer from AT5G56840 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011093715.1 | 7e-54 | transcription factor KUA1-like | ||||
TrEMBL | A0A4D9A5S4 | 3e-48 | A0A4D9A5S4_SALSN; Uncharacterized protein | ||||
STRING | EOY30492 | 2e-46 | (Theobroma cacao) | ||||
STRING | Migut.J00595.1.p | 3e-46 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3385 | 21 | 47 |