PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100199140061

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

HB-other

Protein Properties

Length: 325aa MW: 36819.9 Da PI: 10.1638

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100199140061	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33.4	7.9e-11	253	303	3	53
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 R +++k q+e+Le+++++++ p+ +++ + + ++L+ ++V WF +Ra Ote100199140061\|100199140061 253 ARKRLKKAQVETLEQVYRRSKRPTNAMISSIVHLTNLPRKRVVKWFEDKRA 303 58999*********************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	10.738	248	308	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.56E-11	249	315	IPR009057	Homeodomain-like
SMART	SM00389	2.3E-7	250	312	IPR001356	Homeobox domain
CDD	cd00086	1.47E-8	251	303	No hit	No description
Gene3D	G3DSA:1.10.10.60	1.8E-9	253	307	IPR009057	Homeodomain-like
Pfam	PF00046	2.1E-8	253	303	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence Send to blast
MMRTKKVRAA YLGRLLHFPF GADVFAIGDR LMKLRFGLCP KMEPPLRFAG LRCFSRRRDV 60 ANSPSTPKKI GKKKVAKKEE EGEDIGEDAF EALFRQLEED LKNDGLLXXX XXXXXXXXXL 120 AKLEQELAEA LEDDDLLVAL GSAALGEEMP VKLKNWQLRR LAYALKDGRR KTSIKNLAAD 180 LCLDRAIVLK LLRDPPPNLV MLSATLPDKP ATKVLAPVEK VEEDVPLETT TNAVKPEVEV 240 KVPVHVMQSN WSARKRLKKA QVETLEQVYR RSKRPTNAMI SSIVHLTNLP RKRVVKWFED 300 KRAEDGVPEQ RVPYEPRASE SVPTS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020551126.1	1e-129	protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBL	A0A4D9AST5	1e-124	A0A4D9AST5_SALSN; Uncharacterized protein
STRING	VIT_04s0008g05190.t01	1e-100	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9428	23	27