PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100199140051
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 178aa    MW: 19168.1 Da    PI: 7.699
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100199140051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.4e-11111165762
                                   HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                                   e ++ k R++A+  R+RKka++  Le +vkeLe++N +L ++l++ ++e++ l++ 
  Ote100199140051|100199140051 111 ENKRLK-RVSAQQARERKKAYLIDLEARVKELETKNAELEERLSTVQNESQMLRQI 165
                                   445555.9*******************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502179.668106169IPR004827Basic-leucine zipper domain
SMARTSM003381.4E-9106168IPR004827Basic-leucine zipper domain
PfamPF001705.1E-9111166IPR004827Basic-leucine zipper domain
CDDcd147043.85E-12113160No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-11117168No hitNo description
SuperFamilySSF579591.31E-8117166No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0010099Biological Processregulation of photomorphogenesis
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0010224Biological Processresponse to UV-B
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MEHVMAQNTA TLIDSSPSDQ NRSNGEMQEQ ATSSIAASSL PSSSERSSSS ALHAEVKEGM  60
ESDDEIRRVP EIGGEAAGAT TSGREGGSVV GITQPAAGGS KKRGRSPADK ENKRLKRVSA  120
QQARERKKAY LIDLEARVKE LETKNAELEE RLSTVQNESQ MLRQILKNTT AGSQEGRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00117ampDAPTransfer from AT5G11260Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081579.15e-79transcription factor HY5 isoform X1
SwissprotQ9SM508e-75HY5_SOLLC; Transcription factor HY5
TrEMBLA0A2G9I2K82e-76A0A2G9I2K8_9LAMI; Uncharacterized protein
TrEMBLA0A4D8YDQ02e-76A0A4D8YDQ0_SALSN; Transcription factor HY5
STRINGMigut.E01790.1.p6e-74(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80372430
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]