PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100199080181 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 259aa MW: 29421.8 Da PI: 6.8906 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.2 | 5.7e-18 | 69 | 122 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k Ote100199080181|100199080181 69 KKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 122 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 131.4 | 3.4e-42 | 68 | 158 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81 ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++alk++n++L+ Ote100199080181|100199080181 68 EKKRRLNLEQVKALEKSFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDILKRQFEALKADNDALK 148 69******************************************************************************* PP HD-ZIP_I/II 82 keveeLreel 91 +++++L+++l Ote100199080181|100199080181 149 SQNQKLHSQL 158 *******997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.28E-19 | 53 | 126 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 16.763 | 64 | 124 | IPR001356 | Homeobox domain |
SMART | SM00389 | 4.1E-18 | 67 | 128 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 3.1E-15 | 69 | 122 | IPR001356 | Homeobox domain |
CDD | cd00086 | 4.68E-16 | 69 | 125 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 2.5E-19 | 71 | 131 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 9.6E-6 | 95 | 104 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 99 | 122 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 9.6E-6 | 104 | 120 | IPR000047 | Helix-turn-helix motif |
Pfam | PF02183 | 5.6E-16 | 124 | 164 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MAFLPIAAES IFRNHENSHF PSSSPQDFHG VPDFLMRRSM SFSDMNPATE EFPADDEGSD 60 DGSQMLGEKK RRLNLEQVKA LEKSFELGNK LEPERKMQLA RALGLQPRQI AIWFQNRRAR 120 WKTKQLEKDY DILKRQFEAL KADNDALKSQ NQKLHSQLLG LKTRESTGSG AINLNKENEW 180 SNGSESSCEV NLKTSSTTDS GRLYLSQRSK LHAAGFPAAS LTPPQLPVSN DCSYGNMFGG 240 IQETQEFWPW SDQHHNNFQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011098601.1 | 1e-121 | homeobox-leucine zipper protein HOX21 | ||||
Swissprot | Q8LC03 | 5e-68 | ATB13_ARATH; Homeobox-leucine zipper protein ATHB-13 | ||||
TrEMBL | A0A2G9G0R5 | 1e-120 | A0A2G9G0R5_9LAMI; Uncharacterized protein | ||||
STRING | Migut.H00906.1.p | 1e-104 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA848 | 24 | 98 |
Publications ? help Back to Top | |||
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