PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100199080061

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

FAR1

Protein Properties

Length: 179aa MW: 20286.2 Da PI: 7.8277

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100199080061	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	32.5	2.9e-10	54	121	2	80
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtk 80 fY+++A+ +GFsvrk +++ ++ e+ +++f sk g + ++ +++trt+Cka+l+++k+++ +w+vt+ Ote100199080061\|100199080061 54 FYCSHAHAMGFSVRKGDQHYFSKRSEVQSKQFD-SKDGIPVSQ----------KPSTRTHCKARLRISKDRERQWKVTR 121 9*************99999999999999998.777877765..........467*******************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.1E-7	54	121	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence Send to blast
MFQTSPMSTC GVIELTEDHF EENETVAHNS VVEQLESKLG VGQIVATVDD AYLFYCSHAH 60 AMGFSVRKGD QHYFSKRSEV QSKQFDSKDG IPVSQKPSTR THCKARLRIS KDRERQWKVT 120 RSTIMKCLGV ITHICCNVSH AKCSTLEAMV NAVSYMEMKQ MSNNIWDLPE KTHTIILIA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G9H0B9	4e-28	A0A2G9H0B9_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA16786	2	3