PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100196950031 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 192aa MW: 21511.3 Da PI: 8.9094 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 97 | 1.5e-30 | 41 | 95 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 k rYkeClkNhA+ +Ggha+DGCgEf+++ g++gt ++lkCaAC CHRnFHR++ + Ote100196950031|100196950031 41 KSRYKECLKNHAVGIGGHATDGCGEFIAA-GDDGTLESLKCAACSCHRNFHRKDAA 95 679*************************9.999********************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 7.0E-28 | 42 | 93 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 5.0E-19 | 43 | 92 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 2.1E-28 | 43 | 93 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 26.329 | 44 | 93 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MEYEEDQEEE HEGEIGLAPS YDESTXXXXX XXXXXXXXXX KSRYKECLKN HAVGIGGHAT 60 DGCGEFIAAG DDGTLESLKC AACSCHRNFH RKDAAADGGG GAAFFXXXXX XXXXXXXXXX 120 XXXXXXXXXX XXXXXXXXXX XRRCWRYRRA PAAAAGGRGR TGRSTITILT LAAARRRRDL 180 GRNSARNRRR RC |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15336 | 4 | 8 |