PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100196490051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 20184.3 Da PI: 6.7574 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.1 | 5e-09 | 110 | 145 | 18 | 55 |
AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 eIrdp+ k r++lg+++t +Aa+a++ a+ k++g Ote100196490051|100196490051 110 EIRDPTR--KGSRVWLGTYDTDVDAARAYDCAAFKIRG 145 7999843..24**********99*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 18.479 | 92 | 153 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.5E-15 | 92 | 159 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.88E-14 | 93 | 155 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.0E-20 | 93 | 154 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.07E-18 | 110 | 153 | No hit | No description |
Pfam | PF00847 | 2.6E-5 | 116 | 145 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MMASSDESLQ LELIRRHLLD DLNYSHYSFD LHFSDSPPSA SDSCSAPNQT VSTFLDSLSD 60 FFEVETRPVS DDICPAKPAP DSMLVSGRGR RGYRGVXXXX XXXXXXXXXE IRDPTRKGSR 120 VWLGTYDTDV DAARAYDCAA FKIRGSKAIL NFPMDAGKLG PPASAGRKRR DKRLNDGCNP 180 CT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-15 | 110 | 154 | 20 | 64 | ATERF1 |
3gcc_A | 2e-15 | 110 | 154 | 20 | 64 | ATERF1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858579.1 | 4e-45 | PREDICTED: ethylene-responsive transcription factor ERF106 | ||||
TrEMBL | A0A022PWJ9 | 1e-43 | A0A022PWJ9_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.F00526.1.p | 1e-44 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |