PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100194770131

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bHLH

Protein Properties

Length: 224aa MW: 24981.3 Da PI: 7.1985

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100194770131	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.5	0.00013	49	95	2	51
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 + + +rE+ Rd++N+ f L + l ++ + Ka+ L+++v+ + Ote100194770131\|100194770131 49 KIHKAAREKLKRDQMNELFLDLSKALGDV---DHHNNGKASLLRETVRLL 95 567789**********************8...899999999999999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	9.845	47	98	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.22E-10	48	120	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.7E-6	49	121	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence Send to blast
MASDTTDSGD DRARISTRWR SKPVDDGCPN LAFTLMLVFK KNTAKLPRKI HKAAREKLKR 60 DQMNELFLDL SKALGDVDHH NNGKASLLRE TVRLLGELVS QMDSLKRENA TLLSEYNYIT 120 SEKTELLEET CALDAQVKRL HDEIDERANS STAPQSRSSA TCLPEEHVGI PVIGHASETT 180 PIMTPMFVMP LPDTSTSKVP SEVSKPRPRY PSSADSWPAH ILTK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011098609.1	5e-77	transcription factor bHLH47 isoform X1
Refseq	XP_011098610.1	3e-77	transcription factor bHLH47 isoform X2
TrEMBL	A0A4D9B6S7	7e-81	A0A4D9B6S7_SALSN; Uncharacterized protein
STRING	Migut.H00911.1.p	3e-70	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4307	19	34