PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ote100193700071

Organism

Ocimum tenuiflorum

Taxonomic ID

204149

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum

Family

bZIP

Protein Properties

Length: 368aa MW: 41426.5 Da PI: 8.9946

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ote100193700071	genome	OteDB	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.4	1.5e-08	240	286	17	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ ele l+++ l +e+ Ote100193700071\|100193700071 240 AQRSRVRKLQYIAELERHVQALQAEGTEISAELEFLNQQNLILSMEN 286 89***********************************9998887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-4	229	288	IPR004827	Basic-leucine zipper domain
CDD	cd14703	6.79E-16	231	279	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.4E-6	240	283	No hit	No description
SuperFamily	SSF57959	8.13E-6	240	282	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence Send to blast
MANSKGPSTT RNMMYNGKNP LLPPKSPFPS LSPSYTEYIP IGPKALPRPR DGSSHHQRTS 60 SESILIEEQP SWLDELLDEP ETPVRKGGHR RSSSDSFAYM DPANAGNMNC AAQDDNKFKN 120 MIPLPPWRSQ DFDIHRDIRQ SSFFMDPNPS GRTKSKPWDT PVNSIVPPRG LPSRDVTAIQ 180 TVGSVNSSHD TDRNPTSSSQ KSDIDSGPQD PKASIDKKDS PHIKNLASET DTKRAKQQFA 240 QRSRVRKLQY IAELERHVQA LQAEGTEISA ELEFLNQQNL ILSMENKALK QRLESISQEQ 300 LIKHFEHEVL EREAGRLRGL YXXXXXXXIS CGHRRAKSKD LDQQFANLSL KHKEASSAHD 360 SVSSQLHM

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence Send to blast

MANSKGPSTT RNMMYNGKNP LLPPKSPFPS LSPSYTEYIP IGPKALPRPR DGSSHHQRTS  60
SESILIEEQP SWLDELLDEP ETPVRKGGHR RSSSDSFAYM DPANAGNMNC AAQDDNKFKN  120
MIPLPPWRSQ DFDIHRDIRQ SSFFMDPNPS GRTKSKPWDT PVNSIVPPRG LPSRDVTAIQ  180
TVGSVNSSHD TDRNPTSSSQ KSDIDSGPQD PKASIDKKDS PHIKNLASET DTKRAKQQFA  240
QRSRVRKLQY IAELERHVQA LQAEGTEISA ELEFLNQQNL ILSMENKALK QRLESISQEQ  300
LIKHFEHEVL EREAGRLRGL YXXXXXXXIS CGHRRAKSKD LDQQFANLSL KHKEASSAHD  360
SVSSQLHM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087712.1	0.0	uncharacterized protein At4g06598
Refseq	XP_011087714.1	0.0	uncharacterized protein At4g06598
Refseq	XP_011087715.1	0.0	uncharacterized protein At4g06598
Refseq	XP_011087716.1	0.0	uncharacterized protein At4g06598
TrEMBL	A0A4D8ZDJ9	0.0	A0A4D8ZDJ9_SALSN; Uncharacterized protein
STRING	Migut.N00836.1.p	1e-159	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2765	17	33