PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100193620041
Organism
Ocimum tenuiflorum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bZIP
Protein Properties Length: 331aa    MW: 35418 Da    PI: 10.3575
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100193620041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.83.7e-16131187359
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                                   + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L  eN++L k+l  +++++ + 
  Ote100193620041|100193620041 131 DAKRMRRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSSLLKRLTDISQKYNEA 187
                                   68******************************************9999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-18129193IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.783131186IPR004827Basic-leucine zipper domain
PfamPF001708.0E-14132185IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-12133183No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-12133185No hitNo description
CDDcd147028.87E-7134185No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
PfamPF124981.8E-41200319IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MAAAGAPPTN ISPDSEEYQA FLKSRLELAC AAVALTRANV KGQVSAAAAA PDNGSQASNS  60
LQLGSHVANK GSTKLLDKES SGPVGVPPLP AIAKKSGVQV KSTTSGSSGE QSXXXXXXXX  120
XXXTQNMNPA DAKRMRRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SSLLKRLTDI  180
SQKYNEAAVD NRVLKADVET LRAKVKMAEE TVKRVTGLNP MFQAISEIST MGMPSFSGSP  240
DTSADAAVPV QDDPKQHYYH APSNSQASVQ DHRIEHGVVE AENVQPNHAA VGGTNKMGRT  300
VSMQRVASLE HLQKRIRGES GPAATQGIGK Q
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091948.11e-148light-inducible protein CPRF2
SwissprotQ990901e-113CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A4D9AS731e-161A0A4D9AS73_SALSN; Uncharacterized protein
STRINGXP_009787496.11e-141(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29342444
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]