PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ote100191620051 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
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Family | WRKY | ||||||||
Protein Properties | Length: 119aa MW: 13008.9 Da PI: 9.9377 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.4 | 1.1e-31 | 47 | 103 | 3 | 58 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 D ++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh Ote100191620051|100191620051 47 DDFSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYEGDHNH 103 99************************998**************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 1.8E-16 | 7 | 43 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 2.1E-33 | 33 | 103 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.585 | 40 | 103 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.45E-27 | 42 | 103 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-36 | 45 | 105 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.8E-27 | 47 | 103 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence Send to blast |
MDDGATAKCG GASSGSRCHC PKKKKSKLKR VVRVPAISLK MADIPPDDFS WRKYGQKPIK 60 GSPHPRGYYK CSSLRGCPAR KHVERALDDP TMLIVTYEGD HNHLHSNADA PPAPVLESS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-22 | 33 | 113 | 2 | 76 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027092449.1 | 1e-68 | probable WRKY transcription factor 7 | ||||
Swissprot | O22176 | 2e-56 | WRK15_ARATH; Probable WRKY transcription factor 15 | ||||
TrEMBL | A0A2G9GX67 | 4e-69 | A0A2G9GX67_9LAMI; Uncharacterized protein | ||||
TrEMBL | A0A4D9BD41 | 6e-69 | A0A4D9BD41_SALSN; Uncharacterized protein | ||||
STRING | XP_009604893.1 | 1e-64 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1220 | 24 | 79 |
Publications ? help Back to Top | |||
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